Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00026204001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00026204001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.1032
Arabidopsis thaliana putative NAC2 protein (At3g49530) mRNA, complete cds /cds=p(197,1606) /gb=AY059734
At.20744
Arabidopsis thaliana no apical meristem (NAM) family protein (AT4G35580) mRNA, complete cds /cds=p(58,1662) /gb=NM_001125650
At.40004
Arabidopsis thaliana ANAC014 (ANAC014) mRNA, complete cds /cds=p(29,1987) /gb=NM_202225
At.41017
Arabidopsis thaliana ANAC045 (Arabidopsis NAC domain containing protein 45); transcription factor (ANAC045) mRNA, complete cds /cds=p(1,1440) /gb=NM_111190
At.50709
Arabidopsis thaliana ANAC086 (Arabidopsis NAC domain containing protein 86); transcription factor (ANAC086) mRNA, complete cds /cds=p(1,1431) /gb=NM_121732
At.53361
87-L022147-065-007-G11-SeLA MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 007-G11, mRNA sequence /clone=007-G11 /gb=DR749828
At.65025
Arabidopsis thaliana TIP mRNA, complete cds /cds=p(198,1553) /gb=AF281062
Hv.27177
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf127o16, mRNA sequence /gb=AK251493
Hv.4825
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf54a18, mRNA sequence /gb=AK249749
Mtr.12198
EST611135 KVKC Medicago truncatula cDNA clone pKVKC-7D7, mRNA sequence /clone=pKVKC-7D7 /gb=BQ165266
Mtr.8273
EST645259 GPOD Medicago truncatula cDNA clone GPOD-34Z35, mRNA sequence /clone=GPOD-34Z35 /gb=CB066636
Os.13570
NEW_RNG33-F03-T7 Rice mixture of leaf, root, panicle Oryza sativa (japonica cultivar-group) cDNA, mRNA sequence /gb=EE590715
Os.83155
Oryza sativa Japonica Group RIM1 mRNA for NAC protein, complete cds /cds=p(1,1953) /gb=AB265821
Os.8787
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA203B11, full insert sequence /gb=CT832968
Os.89249
Oryza sativa Japonica Group cDNA clone:002-104-B01, full insert sequence /cds=p(63,1142) /gb=AK064178
Os.89536
CR290197 Oryza sativa library (Han B) Oryza sativa cDNA clone y787d06p5, mRNA sequence /clone=y787d06p5 /gb=CR290197
Pth.11862
F111P59.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F111P59 3', mRNA sequence /clone=F111P59 /clone_end=3' /gb=CK091605

Domain Architecture

NAM PF02365 GSVIVP00026204001
DomainStartEndBit scoreE-value
NAM9139295.71e-85

Sequences