Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00028570001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00028570001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

491912 Score: 1

Arabidopsis thaliana

AT4G28530.1 Score: 1

Carica papaya

evm.TU.supercontig_165.12 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g43560.1 Score: 1

Physcomitrella patens

148520 Score: 1

Populus trichocarpa

205893 Score: 1

Sorghum bicolor

5056093 Score: 1

Zea mays

GRMZM2G081930_P01 Score: 1

Expression data

Expressed Sequence Tags

At.32009
Arabidopsis thaliana ANAC074 (Arabidopsis NAC domain containing protein 74); transcription factor (ANAC074) mRNA, complete cds /cds=p(174,1232) /gb=NM_118995
At.39159
Arabidopsis thaliana ANAC038/ANAC039; transcription factor (ANAC038/ANAC039) mRNA, complete cds /cds=p(95,1045) /gb=NM_179723
At.55538
Arabidopsis thaliana CUC2 (CUP-SHAPED COTYLEDON 2); transcription factor (CUC2) mRNA, complete cds /cds=p(29,1156) /gb=NM_124774
Hv.27312
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf7e16, mRNA sequence /gb=AK248480
Mtr.3392
EST1226653 MTY Medicago truncatula cDNA clone MTYAW81, mRNA sequence /clone=MTYAW81 /gb=DW017692
Os.15708
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA218A09, full insert sequence /gb=CT830107
Os.36651
CT856025 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone OSIGCEA049A17, mRNA sequence /clone=OSIGCEA049A17 /gb=CT856025
Os.39129
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115P09, full insert sequence /gb=CT834701
Os.51120
Oryza sativa Japonica Group cDNA clone:J023075A01, full insert sequence /cds=p(234,1229) /gb=AK070982
Os.51378
Oryza sativa Japonica Group cDNA clone:001-105-G11, full insert sequence /cds=p(105,1076) /gb=AK062675
Os.53228
Oryza sativa Japonica Group cDNA clone:J023097O13, full insert sequence /gb=AK071464
Ppa.19643
CBAW1370.fwd CBAW Physcomitrella patens subsp. patens Gransden - dessicated (H) Physcomitrella patens subsp. patens cDNA clone CBAW1370 5', mRNA sequence /clone=CBAW1370 /clone_end=5' /gb=FC431023
Sbi.7063
ANR1_2_E11.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_2_E11_A002 5', mRNA sequence /clone=ANR1_2_E11_A002 /clone_end=5' /gb=CX606383 /gi=57803843
Vvi.2352
S7B00671 Berries 14mm with GA3 (VvS7) Vitis vinifera cDNA clone S7B00671, mRNA sequence /clone=S7B00671 /gb=EE093464

Domain Architecture

NAM PF02365 GSVIVP00028570001
DomainStartEndBit scoreE-value
NAM10138272.11.3e-78

Sequences