Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00028932001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00028932001
Family
MYB-related
3D structure (top 5)
1IRZ 2CU7 2ELK 2CRG
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

476127 Score: 1

Arabidopsis thaliana

AT1G70000.1 Score: 1

Carica papaya

evm.TU.supercontig_5.308 Score: 1

Populus trichocarpa

821909 Score: 1

Expression data

Expressed Sequence Tags

At.23392
Arabidopsis thaliana myb family transcription factor (AT5G47390) mRNA, complete cds /cds=p(212,1309) /gb=NM_124110
At.35354
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-29-L19 /cds=p(63,848) /gb=AK227711
Hv.6265
Hordeum vulgare mRNA for MYBSt1 protein /cds=p(1,945) /gb=AJ965496
Mtr.13735
MTYEC89TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV260876
Mtr.14074
EST1226559 MTY Medicago truncatula cDNA clone MTYAV63, mRNA sequence /clone=MTYAV63 /gb=DW017598
Mtr.16497
EST1227431 MTY Medicago truncatula cDNA clone MTYB701, mRNA sequence /clone=MTYB701 /gb=DW018470
Mtr.3679
EST1224491 MTY Medicago truncatula cDNA clone MTYA640, mRNA sequence /clone=MTYA640 /gb=DW015530
Mtr.4350
EST641894 GPOD Medicago truncatula cDNA clone GPOD-37K19, mRNA sequence /clone=GPOD-37K19 /gb=CA917747
Os.11458
Oryza sativa Japonica Group clone KCB704E08 myb transcription factor mRNA, complete cds /cds=p(38,1189) /gb=EU837252
Ppa.6379
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_168779) mRNA, complete cds /cds=p(393,1349) /gb=XM_001775204
Pth.10577
Populus trichocarpa clone WS01230_F05 unknown mRNA /cds=p(116,1054) /gb=EF147391
Vvi.1267
VV_PEd0010c02.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV239979
Vvi.23289
VV_PEd03f02.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241970
Vvi.7435
WIN061.C21_H14 Cab Sauv seed normalized (WIN06) Vitis vinifera cDNA clone WIN061_H14 3', mRNA sequence /clone=WIN061_H14 /clone_end=3' /gb=EC957023

Domain Architecture

Myb_DNA-binding PF00249 GSVIVP00028932001
DomainStartEndBit scoreE-value
Myb_DNA-binding8513247.26.5e-11

Sequences