Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00029499001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00029499001
Family
SET
3D structure (top 5)
2H21
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

324038 Score: 1

Arabidopsis thaliana

AT3G55080.1 Score: 1

Carica papaya

evm.TU.supercontig_1.287 Score: 1

Selaginella moellendorffii

102436 Score: 1

Expression data

Expressed Sequence Tags

At.50280
Arabidopsis thaliana SET domain-containing protein (AT3G55080) mRNA, complete cds /cds=p(68,1459) /gb=NM_115366
Hv.7068
HDP40L01w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP40L01, mRNA sequence /clone=HDP40L01 /gb=EX585934
Mtr.11926
Medicago truncatula clone MTYFL_FM_FN_FO1G-C-21 unknown mRNA /cds=p(32,661) /gb=BT053051
Os.87549
CT854079 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone OSIGCRA114J15, mRNA sequence /clone=OSIGCRA114J15 /gb=CT854079
Vvi.22375
WIN0521.C21_B01 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0521_B01 3', mRNA sequence /clone=WIN0521_B01 /clone_end=3' /gb=EC940892

Domain Architecture

SET PF00856 GSVIVP00029499001
DomainStartEndBit scoreE-value
SET322523.61.7e-05

Sequences