Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00029905001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00029905001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_3.313 Score: 1

Populus trichocarpa

773505 Score: 1

Sorghum bicolor

4817544 Score: 1
5006651 Score: 1

Vitis vinifera

GSVIVP00007288001 Score: 1
GSVIVP00029905001 Score: 1

Zea mays

GRMZM2G178998_P01 Score: 1
GRMZM2G178998_P02 Score: 1

Expression data

Expressed Sequence Tags

At.33635
Arabidopsis thaliana ANAC070 (Arabidopsis NAC domain containing protein 70); transcription factor (ANAC070) mRNA, complete cds /cds=p(1,1026) /gb=NM_117103
At.43180
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH95ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX817252
At.50400
Arabidopsis thaliana ANAC076/VND2 (VASCULAR-RELATED NAC-DOMAIN 2); transcription factor (ANAC076/VND2) mRNA, complete cds /cds=p(202,1335) /gb=NM_119783
At.52328
Arabidopsis thaliana VND5 (VASCULAR RELATED NAC-DOMAIN PROTEIN 5); transcription factor (VND5) mRNA, complete cds /cds=p(1,1185) /gb=NM_104947
At.52795
Arabidopsis thaliana VND1 (VASCULAR RELATED NAC-DOMAIN PROTEIN 1); transcription factor (VND1) mRNA, complete cds /cds=p(1,1098) /gb=NM_127362
At.55682
Arabidopsis thaliana VND6 (VASCULAR-RELATED NAC-DOMAIN 6); transcription factor (VND6) mRNA, complete cds /cds=p(1,1047) /gb=NM_125632
Hv.27222
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf17a09, mRNA sequence /gb=AK249120
Os.10581
Oryza sativa Japonica Group cDNA clone:002-148-G11, full insert sequence /gb=AK109860
Os.50054
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI245A08, full insert sequence /gb=CT833125
Os.51831
Oryza sativa Japonica Group cDNA clone:001-123-E07, full insert sequence /cds=p(246,1325) /gb=AK063943
Os.56173
Oryza sativa Japonica Group cDNA clone:002-124-A06, full insert sequence /cds=p(663,1241) /gb=AK109552
Os.62399
Oryza sativa (japonica cultivar-group) Os03g0127200 (Os03g0127200) mRNA, complete cds /cds=p(1,1101) /gb=NM_001055366

Domain Architecture

NAM PF02365 GSVIVP00029905001
DomainStartEndBit scoreE-value
NAM7136315.88.9e-92

Sequences