Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00030071001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00030071001
Family
MYB-related
3D structure (top 5)
1H89 1H8A 1FPO 1GH6 3HHO
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

478482 Score: 1

Arabidopsis thaliana

AT3G11450.1 Score: 1

Cyanidioschyzon merolae

CMA124C Score: 1

Chlamydomonas reinhardtii

298349 Score: 1

Coccomyxa sp. C-169

82454 Score: 1

Physcomitrella patens

189058 Score: 1

Populus trichocarpa

829311 Score: 1

Selaginella moellendorffii

74197 Score: 1

Zea mays

AC191253.3_FGP045 Score: 1
AC198763.3_FGP048 Score: 1

Expression data

Expressed Sequence Tags

At.20710
Arabidopsis thaliana DNAJ heat shock N-terminal domain-containing protein / cell division protein-related (AT3G11450) mRNA, complete cds /cds=p(1,1992) /gb=NM_111978
At.32898
Arabidopsis thaliana DNAJ heat shock N-terminal domain-containing protein / cell division protein-related (AT5G06110) mRNA, complete cds /cds=p(1,1992) /gb=NM_120693
Hv.7070
BES1824103d03 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010D033 5-PRIME, mRNA sequence /clone=MPMGp2010D03103 /clone_end=5' /gb=CK123289
Mtr.9880
Medicago truncatula clone MTYFL_FM_FN_FO1G-C-13 unknown mRNA /cds=p(32,778) /gb=BT053190
Os.16983
Oryza sativa Japonica Group cDNA clone:002-104-B02, full insert sequence /gb=AK112087
Pba.5702
WS02548.C21_M17 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02548_M17 3', mRNA sequence /clone=WS02548_M17 /clone_end=3' /gb=DT491791
Ppa.10885
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_226091) mRNA, complete cds /cds=p(376,2322) /gb=XM_001782852
Ppa.19379
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_59175) mRNA, complete cds /cds=p(1,1899) /gb=XM_001772365
Ppa.20676
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_189058) mRNA, complete cds /cds=p(1,2055) /gb=XM_001770594
Pth.14416
WS0231.B21_K04 PT-MB-A-13 Populus trichocarpa cDNA clone WS0231_K04 3', mRNA sequence /clone=WS0231_K04 /clone_end=3' /gb=CV239197
Pth.14482
WS0233.B21_O17 PT-MB-A-13 Populus trichocarpa cDNA clone WS0233_O17 3', mRNA sequence /clone=WS0233_O17 /clone_end=3' /gb=CV239938
Pth.5702
WS02548.C21_M17 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02548_M17 3', mRNA sequence /clone=WS02548_M17 /clone_end=3' /gb=DT491791
Ptp.6817
T092D10.5pR Populus shoot meristem cDNA library Populus tremula x Populus tremuloides cDNA clone T092D10 5', mRNA sequence /clone=T092D10 /clone_end=5' /gb=DN499841

Domain Architecture

DnaJ PF00226 GSVIVP00030071001
DomainStartEndBit scoreE-value
DnaJ9717681.33.4e-21
Myb_DNA-binding590639353e-07

Sequences