Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00030573001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00030573001
Family
C2H2
3D structure (top 5)
2D5U 2DZK 2CCQ 1WJ4 2CR5
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Expression data

Expressed Sequence Tags

At.43257
Arabidopsis thaliana PUX2 (PLANT UBX DOMAIN-CONTAINING PROTEIN 2); nucleic acid binding / zinc ion binding (PUX2) mRNA, complete cds /cds=p(100,1476) /gb=NM_126226
Mtr.15762
EST638601 MTUS Medicago truncatula cDNA clone MTUS-33E1, mRNA sequence /clone=MTUS-33D12 /gb=CA920883
Sbi.234
WS1_30_A12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA sequence /gb=AW679711
Vvi.12430
sT7aVVM023H02009 VVM Vitis vinifera cDNA clone VVM023H02009 5' similar to emb_CAO42345.1 unnamed protein product [Vitis vinifera]. Expect = 2e-88, mRNA sequence /clone=VVM023H02009 /clone_end=5' /gb=FC068998
Vvi.9443
VV_PEd04g08.b1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV242197

Domain Architecture

zf-C2H2 PF00096 GSVIVP00030573001
DomainStartEndBit scoreE-value
zf-C2H212314522.80.0014
PUB17926691.72.5e-24
UBX35644317.50.002

Sequences