Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00030583001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00030583001
Family
SET
3D structure (top 5)
2H21
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

472886 Score: 1

Arabidopsis thaliana

AT1G24610.1 Score: 1

Carica papaya

evm.TU.supercontig_2.194 Score: 1

Expression data

Expressed Sequence Tags

At.15911
Arabidopsis thaliana SET domain-containing protein (AT1G24610) mRNA, complete cds /cds=p(36,1466) /gb=NM_102303
Mtr.9242
AC0738 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY615651
Os.12016
Oryza sativa Japonica Group cDNA clone:J033058C09, full insert sequence /cds=p(98,1558) /gb=AK121645
Sbi.16366
HS1_59_E11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_59_E11_A012 5' similar to mitochondrial genome and/or plastid genome, mRNA sequence /clone=HS1_59_E11_A012 /clone_end=5' /gb=CD211373 /gi=30947395

Domain Architecture

SET PF00856 GSVIVP00030583001
DomainStartEndBit scoreE-value
SET3828190.36.9e-24

Sequences