Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00030611001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00030611001
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

876867 Score: 1

Arabidopsis thaliana

AT1G67970.1 Score: 1

Carica papaya

evm.TU.supercontig_2.158 Score: 1

Populus trichocarpa

822047 Score: 1

Expression data

Expressed Sequence Tags

Mtr.10306
NF067D12STT1F110 Developing stem Medicago truncatula cDNA clone NF067D12ST 5', mRNA sequence /clone=NF067D12ST /clone_end=5' /gb=BQ137105
Mtr.22152
NF106H11DT1F1094 Drought Medicago truncatula cDNA clone NF106H11DT 5', mRNA sequence /clone=NF106H11DT /clone_end=5' /gb=BF636270
Os.9717
Oryza sativa Japonica Group cDNA clone:J023088F14, full insert sequence /cds=p(126,1646) /gb=AK100430
Pba.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
Pba.6450
WS02543.B21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C13 3', mRNA sequence /clone=WS02543_C13 /clone_end=3' /gb=DT489777
Ppa.16751
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_206139) mRNA, partial cds /cds=p(377,1177) /gb=XM_001758240
Pth.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
Pth.6450
WS02543.B21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C13 3', mRNA sequence /clone=WS02543_C13 /clone_end=3' /gb=DT489777
Pth.9383
Populus trichocarpa clone WS01230_L11 unknown mRNA /cds=p(80,1258) /gb=EF147413
Vvi.9638
VV_PEb17h05.g1 Vitis vinifera cv. perlette LibB Vitis vinifera cDNA, mRNA sequence /gb=EV235046

Domain Architecture

HSF_DNA-bind PF00447 GSVIVP00030611001
DomainStartEndBit scoreE-value
HSF_DNA-bind12186230.44.5e-66

Sequences