Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00032772001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00032772001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_94.50 Score: 1

Expression data

Expressed Sequence Tags

At.10430
Arabidopsis thaliana At1g61110 mRNA for unknown protein, complete cds, clone: RAFL19-05-K20 /cds=p(117,1088) /gb=AK117878
At.20460
Arabidopsis thaliana ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55); transcription factor (ATNAC3) mRNA, complete cds /cds=p(115,1068) /gb=NM_112418
At.42943
Arabidopsis thaliana mRNA for NAM-like protein, complete cds, clone: RAFL14-07-D22 /cds=p(119,1198) /gb=AK227417
Hv.1425
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf19c03, mRNA sequence /gb=AK249102
Hv.6550
Hordeum vulgare subsp. vulgare mRNA for putative NAC transcription factor (nac4 gene) /cds=p(156,992) /gb=AM500853
Mtr.4556
EST611106 KVKC Medicago truncatula cDNA clone pKVKC-7B8, mRNA sequence /clone=pKVKC-7B8 /gb=BQ165237
Os.26695
RECm0544 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone EI051E13, BI073B11, EI053I04, BI157H21, EI073L16, EI114F05, EI11 5', mRNA sequence /clone=EI051E13,_BI073B11,_EI053I04,_BI157H21,_EI073L16, _EI114F
Os.4384
Oryza sativa (japonica cultivar-group) NAC protein mRNA, complete cds /cds=p(105,1061) /gb=AY986504
Pth.8122
Populus trichocarpa clone WS01228_D08 unknown mRNA /cds=p(89,790) /gb=EF147142
Sbi.15189
OX1_57_D06.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_57_D06_A002 5', mRNA sequence /clone=OX1_57_D06_A002 /clone_end=5' /gb=CN137491 /gi=45971143
Vvi.13333
VVE004G09_148460 An expressed sequence tag database for abiotic stressed roots of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVE004G09 5, mRNA sequence /clone=VVE004G09 /clone_end=5' /gb=CB834298
Vvi.23623
sT7aVVM015J07024 VVM Vitis vinifera cDNA clone VVM015J07024 5' similar to emb_CAO39228.1 unnamed protein product [Vitis vinifera]. Expect = 5e-118, mRNA sequence /clone=VVM015J07024 /clone_end=5' /gb=FC066362

Domain Architecture

NAM PF02365 GSVIVP00032772001
DomainStartEndBit scoreE-value
NAM35162205.91e-58

Sequences