Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00033294001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00033294001
Family
C2H2
3D structure (top 5)
1NJQ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

909054 Score: 1
910560 Score: 1

Arabidopsis thaliana

AT1G80730.1 Score: 1

Carica papaya

evm.TU.supercontig_10.93 Score: 1

Populus trichocarpa

178852 Score: 1

Expression data

Expressed Sequence Tags

At.1642
Arabidopsis thaliana mRNA for ZFP3 zinc finger protein, complete cds, clone: RAFL14-29-I08 /cds=p(68,775) /gb=AK227706
At.64906
Arabidopsis thaliana zinc finger protein 1 (ZFP1) mRNA, complete cds /cds=p(69,755) /gb=L39644
Pba.6657
WS02531.B21_K24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02531_K24 3', mRNA sequence /clone=WS02531_K24 /clone_end=3' /gb=DT486694
Pba.8509
WS02525.BR_I09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02525_I09 5', mRNA sequence /clone=WS02525_I09 /clone_end=5' /gb=DT479336
Pth.6657
WS02531.B21_K24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02531_K24 3', mRNA sequence /clone=WS02531_K24 /clone_end=3' /gb=DT486694
Pth.8509
WS0251.B21_N16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0251_N16 3', mRNA sequence /clone=WS0251_N16 /clone_end=3' /gb=CV240607
Ptp.44
A031P65.3pR Hybrid aspen plasmid library Populus tremula x Populus tremuloides cDNA clone A031P65 3', mRNA sequence /clone=A031P65 /clone_end=3' /gb=CK088023

Domain Architecture

zf-C2H2 PF00096 GSVIVP00033294001
DomainStartEndBit scoreE-value
zf-C2H210112320.60.0067

Sequences