Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00034106001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00034106001
Family
MYB-related
3D structure (top 5)
2ROH 2AJE 2CKX 2JUH 1ITY
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

476400 Score: 1

Arabidopsis thaliana

AT1G72650.1 Score: 1
AT1G72650.2 Score: 0.99

Carica papaya

evm.TU.supercontig_25.107 Score: 1

Physcomitrella patens

168075 Score: 1

Populus trichocarpa

815137 Score: 1

Expression data

Expressed Sequence Tags

Ptp.11152
X023E03 Populus wood cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU895395
Vvi.23915
sT7aVVM006L24086 VVM Vitis vinifera cDNA clone VVM006L24086 5' similar to emb_CAO45641.1 unnamed protein product [Vitis vinifera]. Expect = 8e-55, mRNA sequence /clone=VVM006L24086 /clone_end=5' /gb=FC063352
Vvi.6914
CAB10002_Ia_Fa_F05 Cabernet Sauvignon Flower Pre-bloom - CAB1 Vitis vinifera cDNA clone CAB10002_Ia_Fa_F05 5', mRNA sequence /clone=CAB10002_Ia_Fa_F05 /clone_end=5' /gb=CB969815

Domain Architecture

Myb_DNA-binding PF00249 GSVIVP00034106001
DomainStartEndBit scoreE-value
Myb_DNA-binding44649629.11.8e-05

Sequences