Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00034609001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00034609001
Family
RWP-RK
3D structure (top 5)
1IP9 1WJ6
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

483462 Score: 1

Arabidopsis thaliana

AT3G59580.1 Score: 1
AT3G59580.2 Score: 1

Carica papaya

evm.TU.supercontig_9.317 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g41850.1 Score: 1

Ostreococcus tauri

11567 Score: 1

Physcomitrella patens

205328 Score: 1

Populus trichocarpa

216379 Score: 1

Sorghum bicolor

4828749 Score: 1

Selaginella moellendorffii

172537 Score: 1

Zea mays

GRMZM2G071422_P02 Score: 1
GRMZM2G071422_P01 Score: 0.957
GRMZM2G105004_P01 Score: 0.957
GRMZM2G105004_P02 Score: 0.942

Expression data

Expressed Sequence Tags

At.34613
Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL21-80-B11 /cds=p(165,2849) /gb=AK220674
Hv.16919
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf33g13, mRNA sequence /gb=AK249277
Os.10084
Oryza sativa Japonica Group cDNA clone:J013000H14, full insert sequence /gb=AK064859
Sbi.11733
DG1_146_G11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA sequence /gb=BE357033
Vvi.5220
WIN064.C21_C13 Cab Sauv seed normalized (WIN06) Vitis vinifera cDNA clone WIN064_C13 3', mRNA sequence /clone=WIN064_C13 /clone_end=3' /gb=EC957944

Domain Architecture

RWP-RK PF02042 GSVIVP00034609001
DomainStartEndBit scoreE-value
RWP-RK597648114.82.9e-31
PB184192386.21.1e-22

Sequences