Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00035134001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00035134001
Family
SNF2
3D structure (top 5)
1Z3I 1Z63 3DMQ 2FWR 1RIF
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

484134 Score: 1

Arabidopsis thaliana

AT2G02090.1 Score: 1

Micromonas pusilla CCMP1545

21809 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g47830.1 Score: 1

Ostreococcus tauri

20661 Score: 1

Populus trichocarpa

566361 Score: 1

Sorghum bicolor

145412 Score: 1

Expression data

Expressed Sequence Tags

At.13358
Arabidopsis thaliana SNF2/RAD54 family (ETL1 subfamily) protein (At2g02090; F5O4.14) mRNA, complete cds /cds=p(198,2489) /gb=AY059857
Ppa.4658
Physcomitrella patens subsp. patens SNF2 family DNA-dependent ATPase (CHR1507) mRNA, complete cds /cds=p(1,1896) /gb=XM_001779467
Ppa.7506
Physcomitrella patens subsp. patens SNF2 family DNA-dependent ATPase (CHR1508) mRNA, complete cds /cds=p(1,2097) /gb=XM_001780415

Domain Architecture

SNF2_N PF00176 GSVIVP00035134001
DomainStartEndBit scoreE-value
SNF2_N18138672.31.7e-18

Sequences