Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00035370001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00035370001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

484160 Score: 1

Arabidopsis thaliana

AT2G02450.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g66490.1 Score: 1

Sorghum bicolor

5054158 Score: 1

Zea mays

GRMZM2G140174_P01 Score: 1

Expression data

Expressed Sequence Tags

At.12993
Arabidopsis thaliana ANAC034/ANAC035 (Arabidopsis NAC domain containing protein 34, Arabidopsis NAC domain containing protein 35); transcription fa> (ANAC034/ANAC035) mRNA, complete cds /cds=p(1,1245) /gb=NM_126301
At.20412
Arabidopsis thaliana RD26 (RESPONSIVE TO DESSICATION 26); transcription factor (RD26) mRNA, complete cds /cds=p(137,1030) /gb=NM_118875
At.20460
Arabidopsis thaliana ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55); transcription factor (ATNAC3) mRNA, complete cds /cds=p(115,1068) /gb=NM_112418
At.28710
Arabidopsis thaliana ANAC036 (Arabidopsis NAC domain containing protein 36); transcription factor (ANAC036) mRNA, complete cds /cds=p(1,831) /gb=NM_127259
At.53107
23-L020913-065-003-G03-SeLA MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 003-G03, mRNA sequence /clone=003-G03 /gb=DR751124
Hv.30238
HVSMEa0008A15f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0008A15f, mRNA sequence /clone=HVSMEa0008A15f /gb=BF625246
Mtr.10336
Medicago truncatula clone MTYFH_FI_FJ_FK1G-G-1 unknown mRNA /cds=p(33,1337) /gb=BT052720
Os.21395
Oryza sativa Japonica Group cDNA clone:002-121-G12, full insert sequence /gb=AK107090
Os.27216
Oryza sativa (japonica cultivar-group) Os05g0418800 (Os05g0418800) mRNA, complete cds /cds=p(1,1254) /gb=NM_001062103
Os.32786
Oryza sativa Japonica Group cDNA clone:J033113D13, full insert sequence /gb=AK102902
Os.53506
Oryza sativa Japonica Group cDNA clone:J033000B16, full insert sequence /gb=AK073013
Pth.8122
Populus trichocarpa clone WS01228_D08 unknown mRNA /cds=p(89,790) /gb=EF147142
Ptp.9239
N036E05 Populus bark cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU815045
Sbi.7555
WOUND1_62_H12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_62_H12_A002 5', mRNA sequence /clone=WOUND1_62_H12_A002 /clone_end=5' /gb=CN149464 /gi=45991179
Vvi.19011
WIN0533.C21_F17 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0533_F17 3', mRNA sequence /clone=WIN0533_F17 /clone_end=3' /gb=EC944952
Vvi.23623
sT7aVVM015J07024 VVM Vitis vinifera cDNA clone VVM015J07024 5' similar to emb_CAO39228.1 unnamed protein product [Vitis vinifera]. Expect = 5e-118, mRNA sequence /clone=VVM015J07024 /clone_end=5' /gb=FC066362

Domain Architecture

NAM PF02365 GSVIVP00035370001
DomainStartEndBit scoreE-value
NAM21148291.22.2e-84

Sequences