Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00035821001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00035821001
Family
HSF
3D structure (top 5)
1HKS 3HTS 1C1G 2CH7 2EFR
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

492972 Score: 1

Arabidopsis thaliana

AT4G18880.1 Score: 1

Carica papaya

evm.TU.supercontig_124.1 Score: 1

Populus trichocarpa

568665 Score: 1

Expression data

Expressed Sequence Tags

Mtr.22152
NF106H11DT1F1094 Drought Medicago truncatula cDNA clone NF106H11DT 5', mRNA sequence /clone=NF106H11DT /clone_end=5' /gb=BF636270
Os.9717
Oryza sativa Japonica Group cDNA clone:J023088F14, full insert sequence /cds=p(126,1646) /gb=AK100430
Pba.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
Pth.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
Vvi.1951
VV_PEa10f06.b1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence /gb=EV230249
Vvi.23635
S9B09290 Ripening Berries (VvS9) Vitis vinifera cDNA clone S9B09290, mRNA sequence /clone=S9B09290 /gb=EE101448

Domain Architecture

HSF_DNA-bind PF00447 GSVIVP00035821001
DomainStartEndBit scoreE-value
HSF_DNA-bind12184209.11.1e-59

Sequences