Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00036402001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00036402001
Family
MYB-related
3D structure (top 5)
2DCE 2COM 2FQ3 2YUS 2IW5
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

491219 Score: 1

Arabidopsis thaliana

AT4G34430.1 Score: 1
AT4G34430.2 Score: 1
AT4G34430.4 Score: 0.996
AT4G34430.3 Score: 0.99

Carica papaya

evm.TU.supercontig_62.133 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g01970.1 Score: 1

Populus trichocarpa

195378 Score: 1

Sorghum bicolor

5048253 Score: 1

Zea mays

GRMZM2G073560_P01 Score: 1
GRMZM2G073560_P02 Score: 0.996
GRMZM2G047038_P01 Score: 0.993

Expression data

Expressed Sequence Tags

Pba.1500
WS02523.B21_C15 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02523_C15 3', mRNA sequence /clone=WS02523_C15 /clone_end=3' /gb=DT483640
Pth.14980
WS0254.B21_D20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0254_D20 3', mRNA sequence /clone=WS0254_D20 /clone_end=3' /gb=CV244284
Pth.1500
WS02523.B21_C15 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02523_C15 3', mRNA sequence /clone=WS02523_C15 /clone_end=3' /gb=DT483640
Vvi.2534
WIN071.C21_D02 Cab Sauv pericarp normalized (WIN07) Vitis vinifera cDNA clone WIN071_D02 3', mRNA sequence /clone=WIN071_D02 /clone_end=3' /gb=EC958302

Domain Architecture

ZZ PF00569 GSVIVP00036402001
DomainStartEndBit scoreE-value
ZZ12316731.14.5e-06
Myb_DNA-binding18322845.32.3e-10

Sequences