Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00036773001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00036773001
Family
CSD
3D structure (top 5)
1H95 1MJC 2KCM 2BH8 1G6P
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

491032 Score: 1

Arabidopsis thaliana

AT2G21060.1 Score: 1

Carica papaya

evm.TU.supercontig_37.164 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g02870.1 Score: 1

Physcomitrella patens

180264 Score: 1

Populus trichocarpa

556614 Score: 1

Sorghum bicolor

4762440 Score: 1

Selaginella moellendorffii

186937 Score: 1

Zea mays

GRMZM2G176223_P01 Score: 1

Expression data

Expressed Sequence Tags

At.19464
Arabidopsis thaliana cold-shock DNA-binding family protein (AT2G17870) mRNA, complete cds /cds=p(50,955) /gb=NM_127341
Mtr.12079
METAF05TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY475319
Vvi.21581
WIN1137.C21_B05 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1137_B05 3', mRNA sequence /clone=WIN1137_B05 /clone_end=3' /gb=EC989585

Domain Architecture

CSD PF00313 GSVIVP00036773001
DomainStartEndBit scoreE-value
CSD572121.62.5e-33
zf-CCHC9511233.58.4e-07
zf-CCHC13615340.47.2e-09

Sequences

protein sequence
transcript sequence