Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00037169001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00037169001
Family
Pseudo ARR-B
3D structure (top 5)
1K66 3HEB 1W25 2JBA 2AYX
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

483843 Score: 1

Arabidopsis thaliana

AT5G24470.1 Score: 1

Carica papaya

evm.TU.supercontig_193.15 Score: 1

Ostreococcus lucimarinus

29755 Score: 1
41670 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g36220.1 Score: 1
LOC_Os09g36220.2 Score: 1

Ostreococcus tauri

23022 Score: 1

Populus trichocarpa

574629 Score: 1

Sorghum bicolor

5056377 Score: 1

Expression data

Expressed Sequence Tags

At.1675
Arabidopsis thaliana unknown protein (At2g46790) mRNA, complete cds /cds=p(794,1729) /gb=AY099676
Mtr.16027
EST306017 KV2 Medicago truncatula cDNA clone KV2-11L8, mRNA sequence /clone=KV2-11L8 /gb=AW585322
Mtr.19448
MTYCY38TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV256565
Os.59215
Oryza sativa Japonica Group cDNA clone:J013051N02, full insert sequence /gb=AK066112
Pba.9585
WS01229.BR_H11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_H11 5', mRNA sequence /clone=WS01229_H11 /clone_end=5' /gb=DT473373
Pth.16941
WS01229.BR_H11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_H11 5', mRNA sequence /clone=WS01229_H11 /clone_end=5' /gb=DT473373
Sbi.10157
PIC1_53_A05.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM325806
Vvi.23600
CA12EI204IIF_C02 Cabernet Sauvignon Leaf - CA12EI Vitis vinifera cDNA clone CA12EI204IIF_C02 5', mRNA sequence /clone=CA12EI204IIF_C02 /clone_end=5' /gb=CA815595
Vvi.2987
WIN052.C21_I22 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN052_I22 3', mRNA sequence /clone=WIN052_I22 /clone_end=3' /gb=EC934856

Domain Architecture

Response_reg PF00072 GSVIVP00037169001
DomainStartEndBit scoreE-value
Response_reg4215691.13.8e-24
CCT477521883.4e-23

Sequences