Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00037297001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00037297001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481629 Score: 1

Arabidopsis thaliana

AT2G27300.1 Score: 1

Carica papaya

evm.TU.supercontig_195.31 Score: 1

Populus trichocarpa

199890 Score: 1

Expression data

Expressed Sequence Tags

At.20744
Arabidopsis thaliana no apical meristem (NAM) family protein (AT4G35580) mRNA, complete cds /cds=p(58,1662) /gb=NM_001125650
At.36167
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX823820
At.50709
Arabidopsis thaliana ANAC086 (Arabidopsis NAC domain containing protein 86); transcription factor (ANAC086) mRNA, complete cds /cds=p(1,1431) /gb=NM_121732
At.52935
Arabidopsis thaliana ANAC040/NTL8 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 40); transcription factor (ANAC040/NTL8) mRNA, complete cds /cds=p(1,1008) /gb=NM_128289
At.7356
Arabidopsis thaliana ANAC089 (Arabidopsis NAC domain containing protein 89); transcription factor (ANAC089) mRNA, complete cds /cds=p(147,1169) /gb=NM_122134
Hv.23644
Hordeum vulgare subsp. vulgare mRNA for transcription factor, complete cds /cds=p(11,1306) /gb=AB362161
Hv.4825
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf54a18, mRNA sequence /gb=AK249749
Hv.5295
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf28m08, mRNA sequence /gb=AK249396
Mtr.12198
EST611135 KVKC Medicago truncatula cDNA clone pKVKC-7D7, mRNA sequence /clone=pKVKC-7D7 /gb=BQ165266
Mtr.8273
EST645259 GPOD Medicago truncatula cDNA clone GPOD-34Z35, mRNA sequence /clone=GPOD-34Z35 /gb=CB066636
Os.83155
Oryza sativa Japonica Group RIM1 mRNA for NAC protein, complete cds /cds=p(1,1953) /gb=AB265821
Os.8787
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA203B11, full insert sequence /gb=CT832968
Os.89536
CR290197 Oryza sativa library (Han B) Oryza sativa cDNA clone y787d06p5, mRNA sequence /clone=y787d06p5 /gb=CR290197
Os.9354
Oryza sativa Japonica Group cDNA clone:J023008J18, full insert sequence /cds=p(84,2054) /gb=AK120773
Pth.11862
F111P59.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F111P59 3', mRNA sequence /clone=F111P59 /clone_end=3' /gb=CK091605

Domain Architecture

NAM PF02365 GSVIVP00037297001
DomainStartEndBit scoreE-value
NAM30157253.74.5e-73

Sequences