Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00037676001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00037676001
Family
C2H2

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

492266 Score: 1

Arabidopsis thaliana

AT4G25610.1 Score: 1

Carica papaya

evm.TU.supercontig_107.72 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g39660.1 Score: 1
LOC_Os09g39660.2 Score: 1

Populus trichocarpa

253984 Score: 1

Sorghum bicolor

4999672 Score: 1

Zea mays

GRMZM2G142502_P02 Score: 1
GRMZM2G161324_P02 Score: 1
GRMZM2G142502_P01 Score: 0.992
GRMZM2G161324_P01 Score: 0.992

Expression data

Expressed Sequence Tags

Pba.1626
WS02512.B21_F13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02512_F13 3', mRNA sequence /clone=WS02512_F13 /clone_end=3' /gb=CV241485
Pba.6406
WS02543.B21_H13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_H13 3', mRNA sequence /clone=WS02543_H13 /clone_end=3' /gb=DT489891
Pth.1626
WS02543.B21_H13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_H13 3', mRNA sequence /clone=WS02543_H13 /clone_end=3' /gb=DT489891
Vvi.16480
CAbud0005_IIIF_B11 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0005_IIIF_B11 5', mRNA sequence /clone=CAbud0005_IIIF_B11 /clone_end=5' /gb=CF514487
Vvi.20037
WIN024.C21_G23 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN024_G23 3', mRNA sequence /clone=WIN024_G23 /clone_end=3' /gb=EC924191

Domain Architecture

zf-C2H2 PF00096 GSVIVP00037676001
DomainStartEndBit scoreE-value
zf-C2H2769824.90.00032

Sequences