Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00037955001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00037955001
Family
SET
3D structure (top 5)
2R3A 1H3I 3F9X 2RFI 1ML9
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Chlorella sp. NC64A

35816 Score: 1

Carica papaya

evm.TU.supercontig_70.69 Score: 1

Chlamydomonas reinhardtii

115484 Score: 1

Micromonas pusilla CCMP1545

7678 Score: 1

Ostreococcus tauri

4775 Score: 1

Populus trichocarpa

572862 Score: 1

Selaginella moellendorffii

123930 Score: 1

Zea mays

GRMZM2G054380_P01 Score: 1
GRMZM2G054380_P02 Score: 1
GRMZM2G054380_P03 Score: 1
GRMZM2G098418_P02 Score: 1
GRMZM2G098418_P03 Score: 1
GRMZM2G098418_P04 Score: 1

Expression data

Expressed Sequence Tags

At.8330
Arabidopsis thaliana At5g13960 mRNA sequence /gb=AY080822
Hv.29524
RUS82F01w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36N01, mRNA sequence /clone=HZ36N01 /gb=FD525948
Os.31816
Oryza sativa Japonica Group cDNA clone:002-114-E02, full insert sequence /gb=AK106700
Ppa.21390
Physcomitrella patens subsp. patens histone methyltransferase Su3-9 group (SDG1519) mRNA, complete cds /cds=p(1,1638) /gb=XM_001775288
Ppa.25419
Physcomitrella patens subsp. patens histone methyltransferase Su3-9 group (SDG1518) mRNA, complete cds /cds=p(1,1602) /gb=XM_001753464
Vvi.21434
WIN1129.C21_B16 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1129_B16 3', mRNA sequence /clone=WIN1129_B16 /clone_end=3' /gb=EC986907

Domain Architecture

SET PF00856 GSVIVP00037955001
DomainStartEndBit scoreE-value
SET42200161.72.2e-45

Sequences