Gene model: LOC_Os01g15460.2

Species: Oryza sativa subsp. japonica Locus LOC_Os01g15460 Gene model LOC_Os01g15460.2 Description zinc finger C-x8-C-x5-C-x3-H type family protein, expressed Family C3H 3D structure (top 5) 1M9O 2RPP 2E5S 2RHK 2CQE
	PDB entry: 1M9O 2RPP 2E5S 2RHK 2CQE 2D9N 3D2N 3D2Q

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

904260 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g15460.1 Score: 1
LOC_Os01g15460.2 Score: 1
LOC_Os01g15460.3 Score: 0.961

Arabidopsis thaliana

AT2G47850.1 Score: 1
AT2G47850.3 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g15460.1 Score: 1
LOC_Os01g15460.2 Score: 1
LOC_Os01g15460.3 Score: 0.961

Populus trichocarpa

229700 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g15460.3 Score: 1
LOC_Os01g15460.1 Score: 0.99
LOC_Os01g15460.2 Score: 0.99

Sorghum bicolor

4797888 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g15460.3 Score: 1
LOC_Os01g15460.1 Score: 0.97
LOC_Os01g15460.2 Score: 0.97

Vitis vinifera

GSVIVP00023577001 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g15460.3 Score: 1
LOC_Os01g15460.1 Score: 0.989
LOC_Os01g15460.2 Score: 0.989

Zea mays

GRMZM2G036837_P01 Score: 1
GRMZM2G036837_P02 Score: 1
GRMZM2G036837_P03 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g15460.1 Score: 1
LOC_Os01g15460.2 Score: 1

• MPSS data
• NCBI EST Profile Viewer (UniGene: Os.9029)
• NCBI EST Profile Viewer (UniGene: Os.9931)
• NCBI EST Profile Viewer (UniGene: Vvi.8684)

Os.9029

Oryza sativa Japonica Group cDNA clone:J033073E09, full insert sequence /cds=p(298,1698) /gb=AK073920

Os.9931

Oryza sativa Japonica Group cDNA clone:J013116H24, full insert sequence /cds=p(333,1727) /gb=AK111633

Vvi.8684

WIN1149.C21_O06 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1149_O06 3', mRNA sequence /clone=WIN1149_O06 /clone_end=3' /gb=EC993939

protein sequence
transcript sequence