Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os01g18584.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os01g18584
Gene model
LOC_Os01g18584.1
Description
OsWRKY9 - Superfamily of TFs having WRKY and zinc finger domains, expressed
Family
WRKY
3D structure (top 5)
1WJ2 2AYD
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_57.20 Score: 1

Populus trichocarpa

552620 Score: 1

Sorghum bicolor

143186 Score: 1

Zea mays

GRMZM2G029795_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.27309
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf78b10, mRNA sequence /gb=AK248555
Os.39939
Oryza sativa (japonica cultivar-group) Os01g0289600 (Os01g0289600) mRNA, complete cds /cds=p(1,1836) /gb=NM_001049319
Pba.6089
WS02546.C21.1_A23 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02546_A23 3', mRNA sequence /clone=WS02546_A23 /clone_end=3' /gb=DT490823
Ppa.14418
CBAX1350.fwd CBAX Physcomitrella patens subsp. patens Gransden - dessicated (L) Physcomitrella patens subsp. patens cDNA clone CBAX1350 5', mRNA sequence /clone=CBAX1350 /clone_end=5' /gb=FC440620
Pth.6089
WS02546.C21.1_A23 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02546_A23 3', mRNA sequence /clone=WS02546_A23 /clone_end=3' /gb=DT490823

Domain Architecture

WRKY PF03106 LOC_Os01g18584.1
DomainStartEndBit scoreE-value
WRKY315375141.62.5e-39

Sequences

protein sequence
transcript sequence