Gene model: LOC_Os01g40670.2

Species: Oryza sativa subsp. japonica Locus LOC_Os01g40670 Gene model LOC_Os01g40670.2 Description single myb histone, putative, expressed Family MYB-related 3D structure (top 5) 1UHM 1UST 1HST 1USS 1GHC
	PDB entry: 1UHM 1UST 1HST 1USS 1GHC 2ROH 1ITY 2JUH

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

474123 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g40670.1 Score: 1
LOC_Os01g40670.2 Score: 0.965

Arabidopsis thaliana

AT1G49950.1 Score: 1
AT1G49950.2 Score: 1
AT1G49950.3 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g40670.1 Score: 1
LOC_Os01g40670.2 Score: 0.965

Carica papaya

evm.TU.supercontig_6.10 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g40670.1 Score: 1
LOC_Os01g40670.2 Score: 1

Sorghum bicolor

4752357 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g40670.1 Score: 1
LOC_Os01g40670.2 Score: 0.938

Selaginella moellendorffii

413266 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g40670.1 Score: 1
LOC_Os01g40670.2 Score: 1

Zea mays

GRMZM2G087817_P02 Score: 1
GRMZM2G087817_P03 Score: 0.925

Oryza sativa subsp. japonica

LOC_Os01g40670.1 Score: 1
LOC_Os01g40670.2 Score: 0.931

• MPSS data
• NCBI EST Profile Viewer (UniGene: Hv.13178)
• NCBI EST Profile Viewer (UniGene: Mtr.17478)
• NCBI EST Profile Viewer (UniGene: Mtr.7648)
• NCBI EST Profile Viewer (UniGene: Os.8369)
• NCBI EST Profile Viewer (UniGene: Sbi.9613)
• NCBI EST Profile Viewer (UniGene: Vvi.8843)

Hv.13178

HWM021cF.03r ITEC HWM Barley Leaf Library Hordeum vulgare subsp. vulgare cDNA clone HWM021cF.03, mRNA sequence /clone=HWM021cF.03 /gb=BE422212

Mtr.17478

METB235TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY477379

Mtr.7648

META350TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY474260

Os.8369

Oryza sativa Japonica Group cDNA clone:J033117F01, full insert sequence /gb=AK103040

Sbi.9613

WOUND1_39_E08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_39_E08_A002 5', mRNA sequence /clone=WOUND1_39_E08_A002 /clone_end=5' /gb=CN146348 /gi=45986221

Vvi.8843

WIN0517.C21_L21 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0517_L21 3', mRNA sequence /clone=WIN0517_L21 /clone_end=3' /gb=EC939798

protein sequence
transcript sequence