version: 3.0
Gene model: LOC_Os01g42970.2
Identification
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Genome Databases
Orthologs and co-orthologs (in-paralogs)
Look for sequence homologs using SIMAP@MIPS
SIMAPOrtholog identification by INPARANOID
Arabidopsis lyrata
478627 Score: 1Oryza sativa subsp. japonica
LOC_Os01g42970.1 Score: 1LOC_Os01g42970.2 Score: 0.987
Arabidopsis thaliana
AT3G12680.1 Score: 1Oryza sativa subsp. japonica
LOC_Os01g42970.1 Score: 1LOC_Os01g42970.2 Score: 1
Carica papaya
evm.TU.supercontig_118.23 Score: 1Oryza sativa subsp. japonica
LOC_Os01g42970.1 Score: 1LOC_Os01g42970.2 Score: 0.99
Physcomitrella patens
131143 Score: 1Oryza sativa subsp. japonica
LOC_Os01g42970.1 Score: 1LOC_Os01g42970.2 Score: 1
Populus trichocarpa
659387 Score: 1Oryza sativa subsp. japonica
LOC_Os01g42970.2 Score: 1LOC_Os01g42970.1 Score: 0.991
Sorghum bicolor
4879172 Score: 1Oryza sativa subsp. japonica
LOC_Os01g42970.2 Score: 1LOC_Os01g42970.1 Score: 0.992
Vitis vinifera
GSVIVP00002135001 Score: 1Oryza sativa subsp. japonica
LOC_Os01g42970.2 Score: 1LOC_Os01g42970.1 Score: 0.991
Zea mays
GRMZM2G093281_P02 Score: 1GRMZM2G122777_P02 Score: 1
Oryza sativa subsp. japonica
LOC_Os01g42970.1 Score: 1LOC_Os01g42970.2 Score: 1
Expression data
Expressed Sequence Tags
- At.5670
- Arabidopsis thaliana HUA1 (ENHANCER OF AG-4 1) (HUA1) mRNA, complete cds /cds=p(142,1716) /gb=NM_112103
- Hv.4165
- Hordeum vulgare subsp. vulgare cDNA clone: FLbaf129b04, mRNA sequence /gb=AK251631
- Mtr.8737
- NF069F01FL1F1015 Developing flower Medicago truncatula cDNA clone NF069F01FL 5', mRNA sequence /clone=NF069F01FL /clone_end=5' /gb=BQ146391
- Os.1486
- Oryza sativa Japonica Group cDNA clone:002-103-E06, full insert sequence /cds=p(96,1481) /gb=AK112116
- Ptp.4402
- T010H11 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU830627
- Sbi.5891
- OX1_60_F11.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_60_F11_A002 5', mRNA sequence /clone=OX1_60_F11_A002 /clone_end=5' /gb=CN137947 /gi=45971995