Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os02g03730.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os02g03730
Gene model
LOC_Os02g03730.1
Description
SWIB/MDM2 domain containing protein, expressed
Family
SWI/SNF-BAF60b
3D structure (top 5)
1V32 1UHR 1V31 2Z5S
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

473362 Score: 1

Arabidopsis thaliana

AT2G35605.1 Score: 1

Physcomitrella patens

130616 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g03730.1 Score: 1
LOC_Os03g55310.1 Score: 1

Populus trichocarpa

730132 Score: 1

Sorghum bicolor

5054613 Score: 1

Selaginella moellendorffii

59520 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g03730.1 Score: 1
LOC_Os03g55310.1 Score: 1

Vitis vinifera

GSVIVP00001170001 Score: 1

Zea mays

GRMZM2G167191_P01 Score: 1

Expression data

Expressed Sequence Tags

Os.10628
CR282346 Oryza sativa library (Han B) Oryza sativa cDNA clone y628a08p5, mRNA sequence /clone=y628a08p5 /gb=CR282346

Domain Architecture

SWIB PF02201 LOC_Os02g03730.1
DomainStartEndBit scoreE-value
SWIB51128127.83.5e-35

Sequences