Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os02g09650.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os02g09650
Gene model
LOC_Os02g09650.1
Description
AP2 domain containing protein, expressed
Family
AP2-EREBP
3D structure (top 5)
1GCC
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

474196 Score: 1

Arabidopsis thaliana

AT1G50640.1 Score: 1

Populus trichocarpa

707534 Score: 1

Sorghum bicolor

148527 Score: 1

Vitis vinifera

GSVIVP00025959001 Score: 1

Zea mays

GRMZM2G039718_P01 Score: 1
GRMZM2G146028_P01 Score: 1

Expression data

Expressed Sequence Tags

At.1645
Arabidopsis thaliana ATERF3/ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3); DNA binding / protein binding / transcription factor/ transcriptio> (ATERF3/ERF3) mRNA, complete cds /cds=p(155,832) /gb=NM_103946
Os.80845
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126M08, full insert sequence /gb=CT829864
Vvi.7125
WIN0554.C21_M09 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0554_M09 3', mRNA sequence /clone=WIN0554_M09 /clone_end=3' /gb=EC952142

Domain Architecture

AP2 PF00847 LOC_Os02g09650.1
DomainStartEndBit scoreE-value
AP2146572.71.3e-18

Sequences