Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os02g49450.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os02g49450
Gene model
LOC_Os02g49450.1
Description
BSD domain-containing protein, putative, expressed
Family
BSD

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

472789 Score: 1

Arabidopsis thaliana

AT1G26300.1 Score: 1

Carica papaya

evm.TU.supercontig_3.231 Score: 1

Physcomitrella patens

184063 Score: 1

Populus trichocarpa

822181 Score: 1

Sorghum bicolor

5055641 Score: 1

Selaginella moellendorffii

99276 Score: 1

Zea mays

GRMZM2G127548_P01 Score: 1
GRMZM2G128368_P01 Score: 1

Expression data

Expressed Sequence Tags

At.26503
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-05-E04 /cds=p(13,441) /gb=AK176184
Hv.22808
BES1824106m16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010M166 5-PRIME, mRNA sequence /clone=MPMGp2010M16106 /clone_end=5' /gb=CK125132
Mtr.10541
MTYD165TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV256855
Os.49597
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102O13, full insert sequence /gb=CT831442
Sbi.11572
DG1_46_G02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA sequence /gb=AW922808
Vvi.5990
WIN032.C21_P16 Cab Sauv seed normalized (WIN03) Vitis vinifera cDNA clone WIN032_P16 3', mRNA sequence /clone=WIN032_P16 /clone_end=3' /gb=EC928383

Domain Architecture

BSD PF03909 LOC_Os02g49450.1
DomainStartEndBit scoreE-value
BSD138198583.5e-14

Sequences