Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os03g25430.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os03g25430
Gene model
LOC_Os03g25430.1
Description
transcription regulator, putative, expressed
Family
GeBP

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

489637 Score: 1

Arabidopsis thaliana

AT3G04930.1 Score: 1

Carica papaya

evm.TU.supercontig_264.16 Score: 1

Populus trichocarpa

650024 Score: 1
752281 Score: 0.937

Sorghum bicolor

5029875 Score: 1

Vitis vinifera

GSVIVP00031117001 Score: 1

Zea mays

GRMZM2G020408_P01 Score: 1
GRMZM2G030458_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.20582
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf98d18, mRNA sequence /gb=AK250922
Os.52622
Oryza sativa Japonica Group cDNA clone:J013146D06, full insert sequence /cds=p(26,781) /gb=AK068356
Os.88810
Oryza sativa (japonica cultivar-group) Os03g0370200 (Os03g0370200) mRNA, complete cds /cds=p(1,543) /gb=NM_001056732
Sbi.5672
POL1_41_G07.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_41_G07_A002 5', mRNA sequence /clone=POL1_41_G07_A002 /clone_end=5' /gb=CF487110 /gi=34515979

Domain Architecture

DUF573 PF04504 LOC_Os03g25430.1
DomainStartEndBit scoreE-value
DUF57381182202.11.5e-57

Sequences