Gene model: LOC_Os03g56090.1

Species: Oryza sativa subsp. japonica Locus LOC_Os03g56090 Gene model LOC_Os03g56090.1 Description MYB family transcription factor, putative, expressed Family MYB 3D structure (top 5) 1H89 1H8A 2K9N 1GV2 2JUH
	PDB entry: 1H89 1H8A 2K9N 1GV2 2JUH 2DIM 1OFC 2AJE 1GVD 2CKX 1GUU 2ROH 2DIN 1W0U 1X41 2IW5 2D9A 1W0T 1ITY 1VF9 2CJJ 2ELK 2CU7 2YUM 2CQR 1UG2 2YUS 2EQR 1XC5 2CQQ

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT1G56160.1 Score: 1

Populus trichocarpa

718027 Score: 1

Sorghum bicolor

4867699 Score: 1

Vitis vinifera

GSVIVP00010034001 Score: 1

Zea mays

GRMZM2G104789_P01 Score: 1

• MPSS data
• NCBI EST Profile Viewer (UniGene: At.10916)
• NCBI EST Profile Viewer (UniGene: At.10923)
• NCBI EST Profile Viewer (UniGene: At.50533)
• NCBI EST Profile Viewer (UniGene: At.742)
• NCBI EST Profile Viewer (UniGene: At.7489)
• NCBI EST Profile Viewer (UniGene: Hv.16001)
• NCBI EST Profile Viewer (UniGene: Mtr.11094)
• NCBI EST Profile Viewer (UniGene: Mtr.1728)
• NCBI EST Profile Viewer (UniGene: Mtr.8106)
• NCBI EST Profile Viewer (UniGene: Os.49824)
• NCBI EST Profile Viewer (UniGene: Os.55636)
• NCBI EST Profile Viewer (UniGene: Os.76732)
• NCBI EST Profile Viewer (UniGene: Os.79998)
• NCBI EST Profile Viewer (UniGene: Os.88582)
• NCBI EST Profile Viewer (UniGene: Os.91599)
• NCBI EST Profile Viewer (UniGene: Ptp.3869)

At.10916

Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX832216

At.10923

Arabidopsis thaliana AtMYB87/MYB87 (myb domain protein 87); DNA binding / transcription factor (AtMYB87/MYB87) mRNA, complete cds /cds=p(32,949) /gb=NM_119940

At.50533

Arabidopsis thaliana ATMYB103/ATMYB80/MS188/MYB103 (MYB DOMAIN PROTEIN 80); DNA binding / transcription factor (ATMYB103/ATMYB80/MS188/MYB103) mRNA, complete cds /cds=p(1,963) /gb=NM_124993

At.742

Arabidopsis thaliana ATMYB84/MYB84/RAX3 (myb domain protein 84); DNA binding / transcription factor (ATMYB84/MYB84/RAX3) mRNA, complete cds /cds=p(207,1139) /gb=NM_114829

At.7489

Arabidopsis thaliana mRNA for Myb-related transcription factor-like protein, complete cds, clone: RAFL16-14-A17 /cds=p(80,1081) /gb=AK228818

Hv.16001

BY845871 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart25d09 5', mRNA sequence /clone=bart25d09 /clone_end=5' /gb=BY845871

Mtr.11094

MEUBI94TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=GE348484

Mtr.1728

EST647911 HOGA Medicago truncatula cDNA clone HOGA-33L19, mRNA sequence /clone=HOGA-33L19 /gb=CB895119

Mtr.8106

AC4591 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY618275

Os.49824

Oryza sativa Japonica Group cDNA clone:J023093J22, full insert sequence /cds=p(122,1072) /gb=AK111788

Os.55636

Oryza sativa Japonica Group cDNA clone:002-143-C10, full insert sequence /gb=AK108452

Os.76732

Oryza sativa Japonica Group cDNA, clone: J065154C10, full insert sequence /cds=p(109,1005) /gb=AK241370

Os.79998

Oryza sativa (japonica cultivar-group) Os02g0786300 (Os02g0786300) mRNA, complete cds /cds=p(1,1692) /gb=NM_001054869

Os.88582

Oryza sativa Japonica Group cDNA clone:006-308-C02, full insert sequence /cds=p(103,1068) /gb=AK112018

Os.91599

OD101C05 OD Oryza sativa cDNA 5' similar to myb - related protein (transcription factor), mRNA sequence /clone_end=5' /gb=BE040062

Ptp.3869

R007C04.5pR Populus root cDNA library Populus tremula x Populus tremuloides cDNA clone R007C04 5', mRNA sequence /clone=R007C04 /clone_end=5' /gb=DN497506

protein sequence
transcript sequence