Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os03g57149.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os03g57149
Gene model
LOC_Os03g57149.1
Description
mTERF domain containing protein, expressed
Family
mTERF

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

482425 Score: 1
497370 Score: 1

Arabidopsis thaliana

AT2G34620.1 Score: 1

Carica papaya

evm.TU.supercontig_139.30 Score: 1

Micromonas sp. RCC299

100789 Score: 1

Physcomitrella patens

130222 Score: 1

Populus trichocarpa

805851 Score: 1

Sorghum bicolor

141388 Score: 1

Vitis vinifera

GSVIVP00028344001 Score: 1

Expression data

Expressed Sequence Tags

At.37779
Arabidopsis thaliana mitochondrial transcription termination factor-related / mTERF-related (AT2G34620) mRNA, complete cds /cds=p(23,934) /gb=NM_129016
Mtr.9147
EST1227360 MTY Medicago truncatula cDNA clone MTYB618, mRNA sequence /clone=MTYB618 /gb=DW018399
Os.81752
Oryza sativa Japonica Group cDNA, clone: J023002I24, full insert sequence /gb=AK240643
Ptp.10669
G070P21.3pR Populus tension wood cDNA library Populus tremula x Populus tremuloides cDNA clone G070P21 3', mRNA sequence /clone=G070P21 /clone_end=3' /gb=CK092208
Sbi.1266
GABR1_40_F07.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_40_F07_A002 5', mRNA sequence /clone=GABR1_40_F07_A002 /clone_end=5' /gb=CX618634 /gi=57817421
Vvi.17641
VV_PEd05e03.b1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV242331
Vvi.17660
WIN1119.C21_G09 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1119_G09 3', mRNA sequence /clone=WIN1119_G09 /clone_end=3' /gb=EC983605

Domain Architecture

mTERF PF02536 LOC_Os03g57149.1
DomainStartEndBit scoreE-value
mTERF26297176.86.1e-50

Sequences