Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os04g45810.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os04g45810
Gene model
LOC_Os04g45810.1
Description
homeobox associated leucine zipper, putative, expressed
Family
HB
3D structure (top 5)
1NK2 2R5Y 2DMT 1ZQ3 1B72
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

4827832 Score: 1

Vitis vinifera

GSVIVP00037197001 Score: 1

Zea mays

GRMZM2G051310_P01 Score: 1
GRMZM2G069616_P01 Score: 1
GRMZM2G170789_P01 Score: 1

Expression data

Expressed Sequence Tags

Os.12134
Oryza sativa Japonica Group cDNA clone:002-155-H12, full insert sequence /gb=AK109177
Os.49245
Oryza sativa Japonica Group cDNA clone:001-119-F01, full insert sequence /cds=p(93,878) /gb=AK063685
Os.81371
CT848241 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone CONTIG10985, mRNA sequence /clone=CONTIG10985 /gb=CT848241
Os.84462
Oryza sativa Japonica Group cDNA, clone: J065054D22, full insert sequence /gb=AK287604
Sbi.2205
ABA1_39_H08.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor cDNA clone ABA1_39_H08_A012 5', mRNA sequence /clone=ABA1_39_H08_A012 /clone_end=5' /gb=CB929116 /gi=30165387

Domain Architecture

Homeobox PF00046 LOC_Os04g45810.1
DomainStartEndBit scoreE-value
Homeobox7312874.93e-19
HALZ12917333.77.4e-07

Sequences