Gene model: LOC_Os05g23670.1

Species: Oryza sativa subsp. japonica Locus LOC_Os05g23670 Gene model LOC_Os05g23670.1 Description transcription factor jumonji, putative, expressed Family Jumonji 3D structure (top 5) 2OX0 2W2I
	PDB entry: 2OX0 2W2I

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Cyanidioschyzon merolae

CMT461C Score: 1

Micromonas pusilla CCMP1545

19881 Score: 1

Micromonas sp. RCC299

56462 Score: 1

Ostreococcus tauri

34223 Score: 1

Physcomitrella patens

136290 Score: 1

Sorghum bicolor

4991161 Score: 1

Vitis vinifera

GSVIVP00035196001 Score: 1

Zea mays

GRMZM2G044301_P01 Score: 1

• MPSS data
• NCBI EST Profile Viewer (UniGene: At.26858)
• NCBI EST Profile Viewer (UniGene: At.27326)
• NCBI EST Profile Viewer (UniGene: At.53035)
• NCBI EST Profile Viewer (UniGene: Hv.15767)
• NCBI EST Profile Viewer (UniGene: Hv.16169)
• NCBI EST Profile Viewer (UniGene: Hv.27190)
• NCBI EST Profile Viewer (UniGene: Os.10868)
• NCBI EST Profile Viewer (UniGene: Pth.16132)
• NCBI EST Profile Viewer (UniGene: Sbi.8331)

At.26858

Arabidopsis thaliana transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (AT1G08620) mRNA, complete cds /cds=p(1,3552) /gb=NM_100735

At.27326

Arabidopsis thaliana transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (AT1G30810) mRNA, complete cds /cds=p(323,2686) /gb=NM_102818

At.53035

Arabidopsis thaliana MEE27 (maternal effect embryo arrest 27); transcription factor (MEE27) mRNA, complete cds /cds=p(1,2421) /gb=NM_129041

Hv.15767

RUS68B10w HF Hordeum vulgare subsp. vulgare cDNA clone HF14D11, mRNA sequence /clone=HF14D11 /gb=FD523224

Hv.16169

Hordeum vulgare subsp. vulgare cDNA clone: FLbaf124d14, mRNA sequence /gb=AK253132

Hv.27190

Hordeum vulgare subsp. vulgare cDNA clone: FLbaf42k21, mRNA sequence /gb=AK249502

Os.10868

Oryza sativa Japonica Group cDNA clone:J023127H13, full insert sequence /cds=p(200,3916) /gb=AK121381

Pth.16132

F057P19.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F057P19 3', mRNA sequence /clone=F057P19 /clone_end=3' /gb=CK091187

Sbi.8331

RHOH1_36_H01.b3_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_36_H01_A002 3', mRNA sequence /clone=RHOH1_36_H01_A002 /clone_end=3' /gb=CN129603 /gi=45957447

protein sequence
transcript sequence