Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os05g25600.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os05g25600
Gene model
LOC_Os05g25600.1
Description
transposon protein, putative, unclassified, expressed
Family
HB

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Os.14637
Oryza sativa Japonica Group cDNA clone:J023088K17, full insert sequence /gb=AK071302
Os.15854
Oryza sativa (japonica cultivar-group) Os07g0543300 (Os07g0543300) mRNA, complete cds /cds=p(1,3063) /gb=NM_001066442
Os.58059
Oryza sativa (japonica cultivar-group) Os03g0432900 (Os03g0432900) mRNA, complete cds /cds=p(1,5514) /gb=NM_001056967
Os.80037
Oryza sativa (japonica cultivar-group) Os03g0114600 (Os03g0114600) mRNA, complete cds /cds=p(1,1992) /gb=NM_001055280

Domain Architecture

Homeobox PF00046 LOC_Os05g25600.1
DomainStartEndBit scoreE-value
Homeobox2350.10.012
PMD188535427.62e-125

Sequences