Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os05g33460.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os05g33460
Gene model
LOC_Os05g33460.1
Description
mTERF domain containing protein, expressed
Family
mTERF

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

149708 Score: 1
150024 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g33460.1 Score: 1
LOC_Os05g33460.2 Score: 1

Vitis vinifera

GSVIVP00023569001 Score: 1
GSVIVP00023571001 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g33460.1 Score: 1
LOC_Os05g33460.2 Score: 1
LOC_Os07g24090.1 Score: 1

Zea mays

GRMZM2G012999_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g33460.1 Score: 1
LOC_Os05g33460.2 Score: 1

Expression data

Expressed Sequence Tags

Hv.12016
HVSMEb0020I14f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0020I14f, mRNA sequence /clone=HVSMEb0020I14f /gb=BG301294
Os.23176
Oryza sativa Japonica Group cDNA clone:J023150H08, full insert sequence /cds=p(11,1210) /gb=AK073042
Sbi.7888
RHOH1_31_E07.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_31_E07_A002 5', mRNA sequence /clone=RHOH1_31_E07_A002 /clone_end=5' /gb=CN128807 /gi=45956009
Sbi.8645
OX1_33_A02.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_33_A02_A002 5', mRNA sequence /clone=OX1_33_A02_A002 /clone_end=5' /gb=CN140000 /gi=45975708

Domain Architecture

mTERF PF02536 LOC_Os05g33460.1
DomainStartEndBit scoreE-value
mTERF9336613.66.1e-09

Sequences