Gene model: LOC_Os05g41240.3

Species: Oryza sativa subsp. japonica Locus LOC_Os05g41240 Gene model LOC_Os05g41240.3 Description Myb-like DNA-binding domain containing protein, putative, expressed Family G2-like 3D structure (top 5) 1IRZ
	PDB entry: 1IRZ

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_33.163 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g41240.1 Score: 1
LOC_Os05g41240.2 Score: 1
LOC_Os05g41240.3 Score: 1

Ostreococcus tauri

35984 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g41240.1 Score: 1
LOC_Os05g41240.2 Score: 1
LOC_Os05g41240.3 Score: 1

Sorghum bicolor

5060723 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g41240.1 Score: 1
LOC_Os05g41240.2 Score: 1
LOC_Os05g41240.3 Score: 1

Vitis vinifera

GSVIVP00023376001 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g41240.1 Score: 1
LOC_Os05g41240.2 Score: 1
LOC_Os05g41240.3 Score: 1

Zea mays

GRMZM2G117854_P01 Score: 1
GRMZM2G117854_P02 Score: 1
GRMZM2G117854_P03 Score: 1
GRMZM2G179730_P01 Score: 1
GRMZM2G179730_P02 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g41240.1 Score: 1
LOC_Os05g41240.2 Score: 1
LOC_Os05g41240.3 Score: 1

• MPSS data
• NCBI EST Profile Viewer (UniGene: At.24449)
• NCBI EST Profile Viewer (UniGene: At.50439)
• NCBI EST Profile Viewer (UniGene: Hv.9487)
• NCBI EST Profile Viewer (UniGene: Mtr.10993)
• NCBI EST Profile Viewer (UniGene: Mtr.12360)
• NCBI EST Profile Viewer (UniGene: Os.13978)
• NCBI EST Profile Viewer (UniGene: Os.14719)
• NCBI EST Profile Viewer (UniGene: Os.47566)
• NCBI EST Profile Viewer (UniGene: Os.5279)
• NCBI EST Profile Viewer (UniGene: Os.7599)
• NCBI EST Profile Viewer (UniGene: Pba.1402)
• NCBI EST Profile Viewer (UniGene: Ppa.13177)
• NCBI EST Profile Viewer (UniGene: Ppa.2229)
• NCBI EST Profile Viewer (UniGene: Ppa.2695)
• NCBI EST Profile Viewer (UniGene: Ppa.3238)
• NCBI EST Profile Viewer (UniGene: Ppa.4715)
• NCBI EST Profile Viewer (UniGene: Pth.2360)
• NCBI EST Profile Viewer (UniGene: Sbi.14619)
• NCBI EST Profile Viewer (UniGene: Vvi.12508)

At.24449

Arabidopsis thaliana myb family transcription factor (AT2G01060) mRNA, complete cds /cds=p(541,1254) /gb=NM_201656

At.50439

Arabidopsis thaliana myb family transcription factor (AT5G06800) mRNA, complete cds /cds=p(213,1340) /gb=NM_120763

Hv.9487

HI06J07w HI Hordeum vulgare subsp. vulgare cDNA clone HI06J07 3-PRIME, mRNA sequence /clone=HI06J07 /clone_end=3' /gb=CB858316

Mtr.10993

Medicago truncatula clone MTYFD_FE_FF_FG1G-F-19 unknown mRNA /cds=p(94,1086) /gb=BT052374

Mtr.12360

AC2769 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617082

Os.13978

Oryza sativa Japonica Group cDNA clone:J023012H08, full insert sequence /cds=p(326,1099) /gb=AK069306

Os.14719

Oryza sativa Japonica Group cDNA clone:J033123H06, full insert sequence /cds=p(314,1180) /gb=AK103241

Os.47566

Oryza sativa (japonica cultivar-group) Os08g0346500 (Os08g0346500) mRNA, complete cds /cds=p(1,924) /gb=NM_001068140

Os.5279

Oryza sativa Japonica Group cDNA clone:J013127L15, full insert sequence /cds=p(276,1715) /gb=AK067950

Os.7599

Oryza sativa Japonica Group cDNA clone:J023114F03, full insert sequence /cds=p(162,1151) /gb=AK071731

Pba.1402

WS02519.BR_I07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02519_I07 5', mRNA sequence /clone=WS02519_I07 /clone_end=5' /gb=DT477286

Ppa.13177

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_233986) mRNA, complete cds /cds=p(1,1566) /gb=XM_001769164

Ppa.2229

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_169970) mRNA, complete cds /cds=p(529,3219) /gb=XM_001777685

Ppa.2695

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_163773) mRNA, complete cds /cds=p(224,1507) /gb=XM_001763286

Ppa.3238

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_171678) mRNA, complete cds /cds=p(1,2136) /gb=XM_001781505

Ppa.4715

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_170944) mRNA, complete cds /cds=p(1,2388) /gb=XM_001779951

Pth.2360

Populus trichocarpa clone WS0126_F15 unknown mRNA /cds=p(93,809) /gb=EF147970

Sbi.14619

GABR1_37_H02.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_37_H02_A002 5', mRNA sequence /clone=GABR1_37_H02_A002 /clone_end=5' /gb=CX618130 /gi=57816917

Vvi.12508

WIN022.C21_K17 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN022_K17 3', mRNA sequence /clone=WIN022_K17 /clone_end=3' /gb=EC923787

protein sequence
transcript sequence