Gene model: LOC_Os05g48690.1

Species: Oryza sativa subsp. japonica Locus LOC_Os05g48690 Gene model LOC_Os05g48690.1 Description transcription factor like protein, putative, expressed Family Trihelix

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_7.70 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g48690.1 Score: 1
LOC_Os05g48690.2 Score: 1

Physcomitrella patens

65143 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g48690.1 Score: 1
LOC_Os05g48690.2 Score: 1

Populus trichocarpa

564061 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g48690.1 Score: 1
LOC_Os05g48690.2 Score: 1

Sorghum bicolor

5010121 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g48690.1 Score: 1
LOC_Os05g48690.2 Score: 1

Selaginella moellendorffii

68039 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g48690.1 Score: 1
LOC_Os05g48690.2 Score: 1

Vitis vinifera

GSVIVP00035872001 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g48690.1 Score: 1
LOC_Os05g48690.2 Score: 1

Zea mays

GRMZM2G157219_P01 Score: 1
GRMZM2G157219_P02 Score: 1
GRMZM2G178791_P01 Score: 0.952
GRMZM2G178791_P02 Score: 0.952

Oryza sativa subsp. japonica

LOC_Os05g48690.1 Score: 1
LOC_Os05g48690.2 Score: 1

• MPSS data
• NCBI EST Profile Viewer (UniGene: Hv.11971)
• NCBI EST Profile Viewer (UniGene: Os.35356)
• NCBI EST Profile Viewer (UniGene: Sbi.10131)
• NCBI EST Profile Viewer (UniGene: Vvi.9457)

Hv.11971

HX05E19r HX Hordeum vulgare subsp. vulgare cDNA clone HX05E19 5-PRIME, mRNA sequence /clone=HX05E19 /clone_end=5' /gb=CA029814

Os.35356

Oryza sativa Japonica Group cDNA clone:J033124C04, full insert sequence /cds=p(551,1591) /gb=AK122091

Sbi.10131

PI1_60_G01.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA, mRNA sequence /gb=BE596967

Vvi.9457

SBB06784 Inflorescence (VvS11) Vitis vinifera cDNA clone SBB06784, mRNA sequence /clone=SBB06784 /gb=EE104894

protein sequence
transcript sequence