Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os06g12100.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os06g12100
Gene model
LOC_Os06g12100.1
Description
mTERF family protein, expressed
Family
mTERF

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

5061535 Score: 1

Zea mays

GRMZM2G060114_P01 Score: 1
GRMZM2G060114_P02 Score: 1

Expression data

Expressed Sequence Tags

Hv.14415
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf133i20, mRNA sequence /gb=AK251853
Hv.16402
BES1824108c10 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010C108 5-PRIME, mRNA sequence /clone=MPMGp2010C10108 /clone_end=5' /gb=CK124265
Hv.25522
RUS15B09w HA Hordeum vulgare subsp. vulgare cDNA clone HA16M16, mRNA sequence /clone=HA16M16 /gb=FD520216
Hv.27204
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf31i04, mRNA sequence /gb=AK249376
Hv.27337
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf153k03, mRNA sequence /gb=AK252570
Hv.27448
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf108l19, mRNA sequence /gb=AK251167
Hv.27461
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf99e03, mRNA sequence /gb=AK251051
Hv.29736
BES1824110b05 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010B0510 5-PRIME, mRNA sequence /clone=MPMGp2010B05110 /clone_end=5' /gb=CK125693
Os.47936
Oryza sativa Japonica Group cDNA clone:J023118A09, full insert sequence /gb=AK071845
Os.52106
Oryza sativa Japonica Group cDNA clone:J013043F09, full insert sequence /gb=AK065868
Os.88693
Oryza sativa (japonica cultivar-group) Os06g0224700 (Os06g0224700) mRNA, complete cds /cds=p(1,1239) /gb=NM_001063726

Domain Architecture

mTERF PF02536 LOC_Os06g12100.1
DomainStartEndBit scoreE-value
mTERF5436016.53.9e-09

Sequences