Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os06g36680.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os06g36680
Gene model
LOC_Os06g36680.1
Description
homeobox domain containing protein, expressed
Family
HB
3D structure (top 5)
1PUF 2DMN 1DU6 1B72 1LE8
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Populus trichocarpa

778787 Score: 1

Sorghum bicolor

5061822 Score: 1

Vitis vinifera

GSVIVP00032172001 Score: 1

Zea mays

GRMZM2G076272_P01 Score: 1
GRMZM2G076272_P04 Score: 0.947

Expression data

Expressed Sequence Tags

Os.56322
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA225A05, full insert sequence /gb=CT833267
Os.83098
Oryza sativa (japonica cultivar-group) Os06g0562300 (Os06g0562300) mRNA, complete cds /cds=p(1,1698) /gb=NM_001064410

Domain Architecture

POX PF07526 LOC_Os06g36680.1
DomainStartEndBit scoreE-value
POX265402-20.33.7e-05
Homeobox451509-3.70.027

Sequences