Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os07g39430.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os07g39430
Gene model
LOC_Os07g39430.1
Description
mTERF family protein, expressed
Family
mTERF

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

495645 Score: 1

Arabidopsis thaliana

AT5G55580.1 Score: 1

Chlorella sp. NC64A

139106 Score: 1

Micromonas sp. RCC299

55284 Score: 1

Ostreococcus lucimarinus

39628 Score: 1

Ostreococcus tauri

30400 Score: 1

Physcomitrella patens

137301 Score: 1

Populus trichocarpa

176026 Score: 1

Sorghum bicolor

5051915 Score: 1

Zea mays

GRMZM2G130773_P01 Score: 1

Expression data

Expressed Sequence Tags

At.27411
Arabidopsis thaliana mitochondrial transcription termination factor family protein / mTERF family protein (AT5G55580) mRNA, complete cds /cds=p(162,1652) /gb=NM_124940
Os.10501
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108A09, full insert sequence /gb=CT832269
Sbi.3629
SA1_6_H12.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor cDNA clone SA1_6_H12_A002 5', mRNA sequence /clone=SA1_6_H12_A002 /clone_end=5' /gb=CD424549 /gi=31330812

Domain Architecture

mTERF PF02536 LOC_Os07g39430.1
DomainStartEndBit scoreE-value
mTERF161468591.8e-14

Sequences