Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os07g45310.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os07g45310
Gene model
LOC_Os07g45310.1
Description
BSD domain-containing protein, putative, expressed
Family
BSD
3D structure (top 5)
1X3A
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

470313 Score: 1

Arabidopsis thaliana

AT1G03350.1 Score: 1

Sorghum bicolor

5000945 Score: 1

Selaginella moellendorffii

416268 Score: 1

Zea mays

GRMZM2G111672_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.2278
AL505953 Hordeum vulgare Barke developing caryopsis (3.-15.DAP) Hordeum vulgare subsp. vulgare cDNA clone HY01A09T 5', mRNA sequence /clone=HY01A09 /clone_end=5' /gb=AL505953
Os.91743
Oryza sativa (japonica cultivar-group) Os07g0647400 (Os07g0647400) mRNA, complete cds /cds=p(1,1383) /gb=NM_001067004
Sbi.19264
WOUND1_84_C04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_84_C04_A002 3', mRNA sequence /clone=WOUND1_84_C04_A002 /clone_end=3' /gb=CN152758 /gi=45997061

Domain Architecture

BSD PF03909 LOC_Os07g45310.1
DomainStartEndBit scoreE-value
BSD18624767.93.8e-17

Sequences