Gene model: LOC_Os08g03310.2

Species: Oryza sativa subsp. japonica Locus LOC_Os08g03310 Gene model LOC_Os08g03310.2 Description zinc finger family protein, putative, expressed Family C3H 3D structure (top 5) 2E5G 1WF0 3D2W 2CPF 2JVO
	PDB entry: 2E5G 1WF0 3D2W 2CPF 2JVO 2DGS 2FY1 2JWN 1WHW 1X4B 2CQG 2E5H 2DGO 1S79 2CQD 2CPY 2DH8 2DNQ 3B4D 1X5U 1IQT 2DGU 2CQB 1FJ7 2YWK 1H2V 1X4C 1HD0 2F9D

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

480130 Score: 1
485672 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g03310.1 Score: 1
LOC_Os08g03310.2 Score: 1
LOC_Os08g03310.6 Score: 1
LOC_Os08g03310.3 Score: 0.919
LOC_Os08g03310.4 Score: 0.919
LOC_Os08g03310.5 Score: 0.911

Arabidopsis thaliana

AT2G05160.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g03310.2 Score: 1
LOC_Os08g03310.1 Score: 0.996

Carica papaya

evm.TU.supercontig_211.13 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g03310.1 Score: 1
LOC_Os08g03310.2 Score: 1
LOC_Os08g03310.6 Score: 1
LOC_Os08g03310.3 Score: 0.916
LOC_Os08g03310.4 Score: 0.916
LOC_Os08g03310.5 Score: 0.907

Oryza sativa subsp. japonica

LOC_Os08g03310.1 Score: 1
LOC_Os08g03310.2 Score: 1
LOC_Os08g03310.6 Score: 1
LOC_Os08g03310.3 Score: 0.938
LOC_Os08g03310.4 Score: 0.938
LOC_Os08g03310.5 Score: 0.932

Physcomitrella patens

137259 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g03310.1 Score: 1
LOC_Os08g03310.2 Score: 1
LOC_Os08g03310.6 Score: 1
LOC_Os08g03310.3 Score: 0.918
LOC_Os08g03310.4 Score: 0.918
LOC_Os08g03310.5 Score: 0.91

Populus trichocarpa

732453 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g03310.1 Score: 1
LOC_Os08g03310.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g03310.1 Score: 1
LOC_Os08g03310.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g03310.1 Score: 1
LOC_Os08g03310.2 Score: 1
LOC_Os08g03310.6 Score: 1
LOC_Os08g03310.3 Score: 0.92
LOC_Os08g03310.4 Score: 0.92
LOC_Os08g03310.5 Score: 0.913

Vitis vinifera

GSVIVP00027197001 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g03310.6 Score: 1
LOC_Os08g03310.1 Score: 0.926
LOC_Os08g03310.2 Score: 0.926
LOC_Os08g03310.3 Score: 0.912
LOC_Os08g03310.4 Score: 0.912
LOC_Os08g03310.5 Score: 0.904

Zea mays

GRMZM2G148090_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g03310.1 Score: 1
LOC_Os08g03310.2 Score: 1

• MPSS data
• NCBI EST Profile Viewer (UniGene: At.53909)
• NCBI EST Profile Viewer (UniGene: Os.23145)
• NCBI EST Profile Viewer (UniGene: Os.71943)
• NCBI EST Profile Viewer (UniGene: Ppa.22636)
• NCBI EST Profile Viewer (UniGene: Ppa.22867)
• NCBI EST Profile Viewer (UniGene: Sbi.5520)

At.53909

Arabidopsis thaliana RNA recognition motif (RRM)-containing protein (AT3G52980) mRNA, complete cds /cds=p(1,1146) /gb=NM_115158

Os.23145

Oryza sativa Japonica Group cDNA clone:J023082B02, full insert sequence /gb=AK111902

Os.71943

OSJNEa17L19.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA clone OSJNEa17L19 5', mRNA sequence /clone=OSJNEa17L19 /clone_end=5' /gb=CB641079

Ppa.22636

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_137259) mRNA, complete cds /cds=p(1,1161) /gb=XM_001771223

Ppa.22867

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_119974) mRNA, complete cds /cds=p(1,1266) /gb=XM_001758199

Sbi.5520

POL1_62_H11.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_62_H11_A002 5', mRNA sequence /clone=POL1_62_H11_A002 /clone_end=5' /gb=CF479967 /gi=34508836

protein sequence
transcript sequence