Gene model: LOC_Os08g06330.1

Species: Oryza sativa subsp. japonica Locus LOC_Os08g06330 Gene model LOC_Os08g06330.1 Description zinc finger C-x8-C-x5-C-x3-H type family protein, expressed Family C3H 3D structure (top 5) 1M9O 2E5S 2RPP 3D2N 2CQE
	PDB entry: 1M9O 2E5S 2RPP 3D2N 2CQE 2D9N 3D2Q 2RHK 2D9M

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

890808 Score: 1

Arabidopsis thaliana

AT1G32360.1 Score: 1

Carica papaya

evm.TU.supercontig_90.53 Score: 1

Populus trichocarpa

554027 Score: 1

Sorghum bicolor

5007510 Score: 1

Selaginella moellendorffii

16791 Score: 1

Vitis vinifera

GSVIVP00015742001 Score: 1

Zea mays

GRMZM2G030795_P02 Score: 1
GRMZM2G030795_P04 Score: 1
GRMZM2G030795_P01 Score: 0.958
GRMZM2G030795_P03 Score: 0.958

• MPSS data
• NCBI EST Profile Viewer (UniGene: At.15521)
• NCBI EST Profile Viewer (UniGene: Hv.14126)
• NCBI EST Profile Viewer (UniGene: Os.48416)
• NCBI EST Profile Viewer (UniGene: Pba.9203)
• NCBI EST Profile Viewer (UniGene: Pth.9203)
• NCBI EST Profile Viewer (UniGene: Sbi.11578)
• NCBI EST Profile Viewer (UniGene: Vvi.10057)

At.15521

Arabidopsis thaliana At1g32359/F27G20.10 mRNA, complete cds /cds=p(352,1506) /gb=AY056407

Hv.14126

HVSMEl0019D05f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEl0019D05f, mRNA sequence /clone=HVSMEl0019D05f /gb=BI950170

Os.48416

Oryza sativa (japonica cultivar-group) Os08g0159800 (Os08g0159800) mRNA, complete cds /cds=p(1,1104) /gb=NM_001067579

Pba.9203

WS02549.C21_B18 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02549_B18 3', mRNA sequence /clone=WS02549_B18 /clone_end=3' /gb=DT491895

Pth.9203

WS02549.C21_B18 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02549_B18 3', mRNA sequence /clone=WS02549_B18 /clone_end=3' /gb=DT491895

Sbi.11578

WS1_98_B06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA sequence /gb=BE593461

Vvi.10057

WIN055.C21_E17 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN055_E17 3', mRNA sequence /clone=WIN055_E17 /clone_end=3' /gb=EC938008

protein sequence
transcript sequence