Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os08g40630.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os08g40630
Gene model
LOC_Os08g40630.1
Description
mTERF domain containing protein, expressed
Family
mTERF

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

914700 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g40630.1 Score: 1
LOC_Os08g40630.2 Score: 1

Arabidopsis thaliana

AT4G19650.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g40630.1 Score: 1
LOC_Os08g40630.2 Score: 1

Carica papaya

evm.TU.supercontig_135.44 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g40630.1 Score: 1
LOC_Os08g40630.2 Score: 1

Populus trichocarpa

576278 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g40630.1 Score: 1
LOC_Os08g40630.2 Score: 1

Sorghum bicolor

5008159 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g40630.1 Score: 1
LOC_Os08g40630.2 Score: 1

Vitis vinifera

GSVIVP00025362001 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g40630.1 Score: 1
LOC_Os08g40630.2 Score: 1

Zea mays

GRMZM2G061542_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g40630.1 Score: 1
LOC_Os08g40630.2 Score: 1

Expression data

Expressed Sequence Tags

Hv.25095
HDP06B14w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP06B14, mRNA sequence /clone=HDP06B14 /gb=EX577134
Os.23927
Oryza sativa Japonica Group cDNA clone:001-124-E07, full insert sequence /cds=p(333,2243) /gb=AK063992
Os.97477
OSIIEb01D04.r OSIIEb Oryza sativa (indica cultivar-group) cDNA clone OSIIEb01D04 3', mRNA sequence /clone=OSIIEb01D04 /clone_end=3' /gb=CB626739

Domain Architecture

mTERF PF02536 LOC_Os08g40630.1
DomainStartEndBit scoreE-value
mTERF317603-11.22.5e-07

Sequences