Gene model: LOC_Os09g12770.1

Species: Oryza sativa subsp. japonica Locus LOC_Os09g12770 Gene model LOC_Os09g12770.1 Description Myb-like DNA-binding domain containing protein, putative, expressed Family G2-like 3D structure (top 5) 1IRZ
	PDB entry: 1IRZ

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

484011 Score: 1

Arabidopsis thaliana

AT2G01060.1 Score: 1

Carica papaya

evm.TU.supercontig_27.191 Score: 1

Populus trichocarpa

828115 Score: 1

Sorghum bicolor

5051025 Score: 1

Selaginella moellendorffii

442062 Score: 1
57477 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g12770.1 Score: 1
LOC_Os09g12770.2 Score: 1

Zea mays

GRMZM2G143881_P01 Score: 1
GRMZM2G173943_P02 Score: 1

• MPSS data
• NCBI EST Profile Viewer (UniGene: At.24449)
• NCBI EST Profile Viewer (UniGene: At.4525)
• NCBI EST Profile Viewer (UniGene: Mtr.10993)
• NCBI EST Profile Viewer (UniGene: Mtr.12360)
• NCBI EST Profile Viewer (UniGene: Os.13978)
• NCBI EST Profile Viewer (UniGene: Os.14719)
• NCBI EST Profile Viewer (UniGene: Os.24994)
• NCBI EST Profile Viewer (UniGene: Os.47566)
• NCBI EST Profile Viewer (UniGene: Os.5279)
• NCBI EST Profile Viewer (UniGene: Os.7599)
• NCBI EST Profile Viewer (UniGene: Pba.1402)
• NCBI EST Profile Viewer (UniGene: Pba.733)
• NCBI EST Profile Viewer (UniGene: Ppa.2229)
• NCBI EST Profile Viewer (UniGene: Ppa.23839)
• NCBI EST Profile Viewer (UniGene: Ppa.2695)
• NCBI EST Profile Viewer (UniGene: Ppa.3238)
• NCBI EST Profile Viewer (UniGene: Ppa.4715)
• NCBI EST Profile Viewer (UniGene: Pth.733)
• NCBI EST Profile Viewer (UniGene: Sbi.14619)

At.24449

Arabidopsis thaliana myb family transcription factor (AT2G01060) mRNA, complete cds /cds=p(541,1254) /gb=NM_201656

At.4525

Arabidopsis thaliana PHR1 (PHOSPHATE STARVATION RESPONSE 1); transcription factor (PHR1) mRNA, complete cds /cds=p(156,1385) /gb=NM_119003

Mtr.10993

Medicago truncatula clone MTYFD_FE_FF_FG1G-F-19 unknown mRNA /cds=p(94,1086) /gb=BT052374

Mtr.12360

AC2769 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617082

Os.13978

Oryza sativa Japonica Group cDNA clone:J023012H08, full insert sequence /cds=p(326,1099) /gb=AK069306

Os.14719

Oryza sativa Japonica Group cDNA clone:J033123H06, full insert sequence /cds=p(314,1180) /gb=AK103241

Os.24994

Oryza sativa Japonica Group cDNA clone:001-116-C05, full insert sequence /cds=p(352,1638) /gb=AK063486

Os.47566

Oryza sativa (japonica cultivar-group) Os08g0346500 (Os08g0346500) mRNA, complete cds /cds=p(1,924) /gb=NM_001068140

Os.5279

Oryza sativa Japonica Group cDNA clone:J013127L15, full insert sequence /cds=p(276,1715) /gb=AK067950

Os.7599

Oryza sativa Japonica Group cDNA clone:J023114F03, full insert sequence /cds=p(162,1151) /gb=AK071731

Pba.1402

WS02519.BR_I07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02519_I07 5', mRNA sequence /clone=WS02519_I07 /clone_end=5' /gb=DT477286

Pba.733

WS02518.B21_N10 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02518_N10 3', mRNA sequence /clone=WS02518_N10 /clone_end=3' /gb=CV243423

Ppa.2229

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_169970) mRNA, complete cds /cds=p(529,3219) /gb=XM_001777685

Ppa.23839

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_99470) mRNA, complete cds /cds=p(1,2343) /gb=XM_001784095

Ppa.2695

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_163773) mRNA, complete cds /cds=p(224,1507) /gb=XM_001763286

Ppa.3238

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_171678) mRNA, complete cds /cds=p(1,2136) /gb=XM_001781505

Ppa.4715

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_170944) mRNA, complete cds /cds=p(1,2388) /gb=XM_001779951

Pth.733

WS02518.B21_N10 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02518_N10 3', mRNA sequence /clone=WS02518_N10 /clone_end=3' /gb=CV243423

Sbi.14619

GABR1_37_H02.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_37_H02_A002 5', mRNA sequence /clone=GABR1_37_H02_A002 /clone_end=5' /gb=CX618130 /gi=57816917

protein sequence
transcript sequence