Gene model: LOC_Os09g13740.1

Species: Oryza sativa subsp. japonica Locus LOC_Os09g13740 Gene model LOC_Os09g13740.1 Description SET domain containing protein, expressed Family SET 3D structure (top 5) 2F69 2R3A 1H3I 3F9X 2RFI
	PDB entry: 2F69 2R3A 1H3I 3F9X 2RFI 1ML9 3H6L 2W5Y 1MVH 3BO5 3DB5 2QPW 3EP0 1N3J 3DAL

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

483538 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.1 Score: 1
LOC_Os09g13740.2 Score: 1

Arabidopsis thaliana

AT2G44150.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.1 Score: 1
LOC_Os09g13740.2 Score: 1

Chlorella sp. NC64A

18588 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.1 Score: 1
LOC_Os09g13740.2 Score: 1

Carica papaya

evm.TU.supercontig_9.229 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.1 Score: 1
LOC_Os09g13740.2 Score: 1

Coccomyxa sp. C-169

28526 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.2 Score: 1
LOC_Os09g13740.1 Score: 0.997

Micromonas pusilla CCMP1545

23211 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.1 Score: 1
LOC_Os09g13740.2 Score: 1

Ostreococcus lucimarinus

5572 Score: 1
5592 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.2 Score: 1
LOC_Os09g13740.1 Score: 0.997

Ostreococcus tauri

22195 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.1 Score: 1
LOC_Os09g13740.2 Score: 1

Physcomitrella patens

33525 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.2 Score: 1
LOC_Os09g13740.1 Score: 0.996

Populus trichocarpa

585029 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.1 Score: 1
LOC_Os09g13740.2 Score: 1

Sorghum bicolor

5051031 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.2 Score: 1
LOC_Os09g13740.1 Score: 0.994

Selaginella moellendorffii

110353 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.1 Score: 1
LOC_Os09g13740.2 Score: 1

Vitis vinifera

GSVIVP00013886001 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.1 Score: 1
LOC_Os09g13740.2 Score: 1

Zea mays

GRMZM2G033694_P01 Score: 1
GRMZM2G033694_P02 Score: 1
GRMZM2G033694_P03 Score: 0.977

Oryza sativa subsp. japonica

LOC_Os09g13740.2 Score: 1
LOC_Os09g13740.1 Score: 0.994

• MPSS data
• NCBI EST Profile Viewer (UniGene: At.54011)
• NCBI EST Profile Viewer (UniGene: Hv.12502)
• NCBI EST Profile Viewer (UniGene: Hv.2514)
• NCBI EST Profile Viewer (UniGene: Os.52214)

At.54011

Arabidopsis thaliana ASHH4 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH4) (ASHH4) mRNA, complete cds /cds=p(1,1059) /gb=NM_115859

Hv.12502

HDP16P06w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP16P06, mRNA sequence /clone=HDP16P06 /gb=EX582359

Hv.2514

HVSMEg0018E08f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0018E08f, mRNA sequence /clone=HVSMEg0018E08f /gb=BG345006

Os.52214

Oryza sativa Japonica Group cDNA clone:J013038F17, full insert sequence /gb=AK065670

protein sequence
transcript sequence