Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os09g23660.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os09g23660
Gene model
LOC_Os09g23660.1
Description
ZIM motif family protein, expressed
Family
Tify

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT1G70700.3 Score: 1

Carica papaya

evm.TU.supercontig_2.204 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g23660.2 Score: 1
LOC_Os09g23660.1 Score: 0.958

Populus trichocarpa

656962 Score: 1
822061 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g23660.2 Score: 1
LOC_Os10g25290.1 Score: 1
LOC_Os09g23660.1 Score: 0.96

Sorghum bicolor

4999904 Score: 1

Selaginella moellendorffii

447809 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g23660.2 Score: 1
LOC_Os09g23660.1 Score: 0.962

Vitis vinifera

GSVIVP00030572001 Score: 1

Zea mays

GRMZM2G126507_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.5736
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf66e13, mRNA sequence /gb=AK250045
Os.12104
Oryza sativa Japonica Group cDNA clone:J033129L12, full insert sequence /gb=AK103459
Os.14666
Oryza sativa Japonica Group cDNA clone:J013002C19, full insert sequence /cds=p(174,1424) /gb=AK065170
Sbi.15916
WOUND1_53_C02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_53_C02_A002 3', mRNA sequence /clone=WOUND1_53_C02_A002 /clone_end=3' /gb=CN147912 /gi=45988770
Sbi.4382
GABR1_25_F11.b1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_25_F11_A002 3', mRNA sequence /clone=GABR1_25_F11_A002 /clone_end=3' /gb=CX616005 /gi=57814792

Domain Architecture

tify PF06200 LOC_Os09g23660.1
DomainStartEndBit scoreE-value
tify18722279.81e-20
CCT_233536152.71.4e-12

Sequences