Plant Transcription factor database - Universität Potsdam

version: 3.0

Gene model: LOC_Os10g39190.1

Identification

Species: Oryza sativa subsp. japonica Locus LOC_Os10g39190 Gene model LOC_Os10g39190.1 Description B3 DNA binding domain containing protein Family ABI3VP1 3D structure (top 5) 1WID 1YEL
	PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

Ortholog identification by INPARANOID

Sorghum bicolor

4966491 Score: 1

Zea mays

GRMZM2G092507_P01 Score: 1
GRMZM2G142999_P01 Score: 1

Expression data

Expressed Sequence Tags

At.23308: Arabidopsis thaliana DNA-binding protein, putative (AT2G36080) mRNA, complete cds /cds=p(165,899) /gb=NM_179929
Os.31989: Oryza sativa Japonica Group cDNA clone:002-102-B12, full insert sequence /gb=AK106367
Sbi.10946: CCC1_7_H05.g1_A007 Callus culture/cell suspension Sorghum bicolor cDNA clone CCC1_7_H05_A007 5', mRNA sequence /clone=CCC1_7_H05_A007 /clone_end=5' /gb=CD228411 /gi=30971845

Domain Architecture

LOC_Os10g39190.1

Domain	Start	End	Bit score	E-value
B3	34	155	106.7	8e-29

Sequences

protein sequence
transcript sequence