Gene model: LOC_Os11g05930.1

Species: Oryza sativa subsp. japonica Locus LOC_Os11g05930 Gene model LOC_Os11g05930.1 Description response regulator receiver domain containing protein, expressed Family Pseudo ARR-B 3D structure (top 5) 1K66 1W25 2JBA 3GRC 1P6Q
	PDB entry: 1K66 1W25 2JBA 3GRC 1P6Q 2RJN 2AYX 1K68 1XHF 3CFY 3GT7 1QKK 2ZAY 2QVG 1DCF 3H5I 3DZD 1MB3 2QXY 1DZ3 2PL1 3HDG 1S8N 3BRE 1MVO 2QZJ 1ZGZ 3CNB 1I3C 3HDV 3C3M 1NY5 2R25 1ZH2 3CRN 1JBE 2QR3 3HEB 1TMY 2A9O 2QSJ 3C97 1DBW 2QV0 1DC7 2JK1 2B4A 3CZ5 1KGS 1YIO 3CG0 2OQR 1QO0 3B2N 2GKG 1YS7 3CG4 2GWR 3EQZ 2PLN 1SRR 3EUL 2J48 3F6C 2RDM 3CU5 2HQR 1A2O 1P2F 3CWO 1A04 3C3W

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G24470.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g05930.1 Score: 1
LOC_Os11g05930.2 Score: 0.901
LOC_Os11g05930.3 Score: 0.901

Chlamydomonas reinhardtii

166515 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g05930.1 Score: 1
LOC_Os11g05930.2 Score: 0.912
LOC_Os11g05930.3 Score: 0.912
LOC_Os11g05930.4 Score: 0.901

Micromonas pusilla CCMP1545

48139 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g05930.1 Score: 1
LOC_Os11g05930.2 Score: 0.912
LOC_Os11g05930.3 Score: 0.912
LOC_Os11g05930.4 Score: 0.901

Ostreococcus lucimarinus

29755 Score: 1
41670 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g05930.1 Score: 1
LOC_Os11g05930.2 Score: 0.915
LOC_Os11g05930.3 Score: 0.915
LOC_Os11g05930.4 Score: 0.905

Ostreococcus tauri

23022 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g05930.1 Score: 1
LOC_Os11g05930.2 Score: 0.916
LOC_Os11g05930.3 Score: 0.916
LOC_Os11g05930.4 Score: 0.905

Sorghum bicolor

5056377 Score: 1

Zea mays

GRMZM2G087293_P01 Score: 1
GRMZM2G087293_P02 Score: 1
GRMZM2G135446_P01 Score: 1
GRMZM2G135446_P02 Score: 1

• MPSS data
• NCBI EST Profile Viewer (UniGene: At.21641)
• NCBI EST Profile Viewer (UniGene: Hv.30069)
• NCBI EST Profile Viewer (UniGene: Mtr.19448)
• NCBI EST Profile Viewer (UniGene: Os.12795)
• NCBI EST Profile Viewer (UniGene: Os.58539)
• NCBI EST Profile Viewer (UniGene: Pba.9585)
• NCBI EST Profile Viewer (UniGene: Ppa.3166)
• NCBI EST Profile Viewer (UniGene: Pth.16941)
• NCBI EST Profile Viewer (UniGene: Sbi.10157)
• NCBI EST Profile Viewer (UniGene: Sbi.4549)
• NCBI EST Profile Viewer (UniGene: Vvi.23600)

At.21641

Arabidopsis thaliana APRR5 (PSEUDO-RESPONSE REGULATOR 5); transcription regulator (APRR5) mRNA, complete cds /cds=p(1,2004) /gb=NM_122355

Hv.30069

HV_CEa0013J20r2 Hordeum vulgare (Blumeria challenged) seedling green leaf cDNA library HV_CEa (HVcDNA0004)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0002J21f, mRNA sequence /clone=HV__Ea0002J21f /gb=GH207356

Mtr.19448

MTYCY38TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV256565

Os.12795

Oryza sativa Japonica Group cDNA clone:J013001E13, full insert sequence /gb=AK120059

Os.58539

Oryza sativa Japonica Group cDNA clone:J023077E22, full insert sequence /gb=AK121136

Pba.9585

WS01229.BR_H11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_H11 5', mRNA sequence /clone=WS01229_H11 /clone_end=5' /gb=DT473373

Ppa.3166

Physcomitrella patens subsp. patens circadian clock protein PRR1 (PpPRR1) mRNA, partial cds /cds=p(1,1278) /gb=XM_001784561

Pth.16941

WS01229.BR_H11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_H11 5', mRNA sequence /clone=WS01229_H11 /clone_end=5' /gb=DT473373

Sbi.10157

PIC1_53_A05.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM325806

Sbi.4549

ANR1_21_D05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_21_D05_A002 3', mRNA sequence /clone=ANR1_21_D05_A002 /clone_end=3' /gb=CX610840 /gi=57809560

Vvi.23600

CA12EI204IIF_C02 Cabernet Sauvignon Leaf - CA12EI Vitis vinifera cDNA clone CA12EI204IIF_C02 5', mRNA sequence /clone=CA12EI204IIF_C02 /clone_end=5' /gb=CA815595

protein sequence
transcript sequence